Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02631 ATGGACAACTTTCCTGACCCATTTTCAGCAACCACCACCAACCCATTAATCCCTGAACAACAAAGCATGGGAGAACTAAAAAATGTTAACTTCCCTGTTGACAACAGTGGACATGTTGGCTTTCCTGACCCTTATTACGCTCCATTTGACCAGAACATGCAGTTCCAACAAGTGAATCAATATCCTTTGCATACCCTTCAAACAGGACAACCTAATGCAATTTATGGGCCACCAAATTCTGTAGTTCAAGGGTGGTCACAACAACCAGAGGAAGAAGAATATAGAAAGAGTGTGGGAACATTGACTAGCAAAGTTGCTAGGGACAAAAGGAAACAAGTAAGACAGAAGAATAAGAGTGTTCCTGTGGCTCCTTTGGTACCAACAAAAGGGATAATAAAGGAACAATCTGTTCCTGGAGGAGGATCAGATGGAAAGCTCACTATCAACCAAGATAGAACTTTCACTGTTTTTTGCAGCCCAGATGGGAAGAAGTTAGAGGAAGTTTTCACAAAGCAGTTGAAGAATAGTGACGTTAGTGTCCTAGGTCGCATTGTGCTCCCAAAGAGGGAGGTTGAGGCAAAGCTTCCACCATTGACAGACAAGGAAGGAAAGGATATTATGGTCAAGGATGTTTATTCTGGGGTGATATGGACCTTGAAATACAAGTATTGGTCTAATAACAGAAGTAGAATGTATGTTCTTGAAAATGCAGGGGAGTTAGTGAACCATTATGAACTACAAATGGGAGATTTTATAACCATTTACGAGGACGAAAGGAAAAATCTGTATGTGTGGGCTAGAAAAAAGACAAATCCAGAAGGCGCGGTGTCTTTGTCAAAGAAAGAAGTTGAAGATGCTAACAACCTTTTGACTTCAATCAATGGTGGTGGAAGTTCTTCAAGTGGAGCAAAATTAGATATGAATATAGCAGAACATGATCAATTGTCGAACATTGCTGGGAACGGGGCACCAAGCCAAACAACCATCGAAGCCACACCAGCAGCACCAGCAGCACCTCTTGGTGGCAATAACCAGTTGATAAGTGACGAAGATGTCTATGGGGGCCTTGACAATATCTTCGAAATTGAGAATAGTTTTCATAGTTTTGATCACTTGAAAGATTACAAGATGTGGCCCTATTGA 1143 0.4138 MDNFPDPFSATTTNPLIPEQQSMGELKNVNFPVDNSGHVGFPDPYYAPFDQNMQFQQVNQYPLHTLQTGQPNAIYGPPNSVVQGWSQQPEEEEYRKSVGTLTSKVARDKRKQVRQKNKSVPVAPLVPTKGIIKEQSVPGGGSDGKLTINQDRTFTVFCSPDGKKLEEVFTKQLKNSDVSVLGRIVLPKREVEAKLPPLTDKEGKDIMVKDVYSGVIWTLKYKYWSNNRSRMYVLENAGELVNHYELQMGDFITIYEDERKNLYVWARKKTNPEGAVSLSKKEVEDANNLLTSINGGGSSSSGAKLDMNIAEHDQLSNIAGNGAPSQTTIEATPAAPAAPLGGNNQLISDEDVYGGLDNIFEIENSFHSFDHLKDYKMWPY 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02631 380 ProSiteProfiles B3 DNA-binding domain profile. 169 270 IPR003340 GO:0003677
Phco4g02631 380 Pfam B3 DNA binding domain 169 269 IPR003340 GO:0003677
Phco4g02631 380 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 115 281 IPR044800 GO:0003700
Phco4g02631 380 CDD B3_DNA 169 264 IPR003340 GO:0003677
Phco4g02631 380 SUPERFAMILY DNA-binding pseudobarrel domain 168 273 IPR015300 -
Phco4g02631 380 Gene3D - 158 276 IPR015300 -
Phco4g02631 380 SMART B3_2 169 270 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02631 Phco-Chr4 47684551 47688224 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phco4g02631 B3 4.2e-12 CL0405