Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02623 ATGGATGATGATGGCAGCAATTCTTGGCTAAGGAGGACCAAATTCTCCCACACAGTATGTCACCGGTTGGATTATTCCAGTTCCAGATTAGGGTCTTTCAGCATTCAGCCAAGGTCACAGCACAGTTCCAGTGCGAAATCAAGGCCAGATGTAACTTTTGTTTCCAAACCCTCCTCGCAGGTTCAGAAAAAGCCCATAATGAGCAAGCAGAGATCTTTGTCCCCTTTGACTGAAACCTCTCTCTCTGAAACATTCAAGGAAGCTAGACATGAGCGGAAGAGGTTCTCCACACCTGGTCCAAGGAGGAAGGAGCATGATAAGAGAATCATGGGGAAGTTACTGAACAAGGATTCTCGTGTATCCAGTTCTAAATCCCCTTACAGCAATCCAATGATTAAATCCCCTTACAACAGTCCCATGACCAAATCCCCTTACAGCAGTCCAATTAGACACCTTGCTTCTATGAAATTAAGCGACAAGTCCAAACAGCGCAAGGATTTAGGATGGACAAAGTATTTTGAACACGGAGGAGGAAAGGTGACTGCTGTGGAAACAGCTGAGGAATGGAATGTTGATCTCTCTAAGCTCTTTGTTGGTGTTAGGTTTGCTCATGGGGCTCACAGCAGGCTTTACCATGGCATGTATGAGGATGAAGCTGTGGCTGTAAAAATTATCAGGGTACCAGATGATGACGAAAATGGAATGTTAGCTGATCGATTAGAGAAACAATTCATTAGAGAAGTGACACTTTTATCTCGTCTCCACCATCGAAATGTTATAAAGTTCGTAGCAGCATGCAGAAAGCCGCCTGTCTATTGTGTTATCACAGAATATCTATCAGAAGGTTCCTTGAGGTCATATTTGCACAAGTTGGAGACAAAAACTATTCCTCTAGAGAAGCTAATTGCTTTTGCTCTGGATATTGCTCGTGGGATGGAATACATACACTCTCAAGGTGTCATTCATCGAGACCTTAAACCAGAGAATGTCCTTATTAATGAAGATTTTCACCTCAAAATTGCTGATTTTGGCATTGCTTGTGAGGAAGCTTACTGTGACTTATTTGCTGATGACCCTGGTACCTACCGCTGGATGGCACCTGAGATGATCAAACGAAAATCCTATGGGAGAAAGGTTGATGTATATAGTTTCGGGCTTATCTTGTGGGAAATGGTTACTGGAACTATACCATATGAGGATATGACTCCCATCCAGGCTGCTTTTGCAGTAGTAAACAAGAATTCAAGGCCAGTTATTCCTTCAGACTGTCCAGCTGCAATGCGAGCTTTAATCGAGCAATGTTGGTCTTTGAATCCGGACAAGAGGCCTGAGTTCTGGCAGATTGCTAAGGTATTAGAACAATTTGAATCTTCGCTTGCTCGTGAAGGAACCCTGACTCTGGTGCAAAACCCTTGTTGCCAAGATCATAAGAAAGGGCTTCTCCATTGGATTCAAAAGCTTGGTCCTGTGCATCAAAACAATGGTCCTGTGCCTAAACCCAAATTTACATGA 1512 0.4332 MDDDGSNSWLRRTKFSHTVCHRLDYSSSRLGSFSIQPRSQHSSSAKSRPDVTFVSKPSSQVQKKPIMSKQRSLSPLTETSLSETFKEARHERKRFSTPGPRRKEHDKRIMGKLLNKDSRVSSSKSPYSNPMIKSPYNSPMTKSPYSSPIRHLASMKLSDKSKQRKDLGWTKYFEHGGGKVTAVETAEEWNVDLSKLFVGVRFAHGAHSRLYHGMYEDEAVAVKIIRVPDDDENGMLADRLEKQFIREVTLLSRLHHRNVIKFVAACRKPPVYCVITEYLSEGSLRSYLHKLETKTIPLEKLIAFALDIARGMEYIHSQGVIHRDLKPENVLINEDFHLKIADFGIACEEAYCDLFADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMVTGTIPYEDMTPIQAAFAVVNKNSRPVIPSDCPAAMRALIEQCWSLNPDKRPEFWQIAKVLEQFESSLAREGTLTLVQNPCCQDHKKGLLHWIQKLGPVHQNNGPVPKPKFT 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02623 503 MobiDBLite consensus disorder prediction 32 82 - -
Phco4g02623 503 Pfam Protein tyrosine and serine/threonine kinase 203 451 IPR001245 GO:0004672|GO:0006468
Phco4g02623 503 Gene3D Phosphorylase Kinase; domain 1 184 280 - -
Phco4g02623 503 ProSiteProfiles Protein kinase domain profile. 196 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02623 503 MobiDBLite consensus disorder prediction 32 145 - -
Phco4g02623 503 CDD STKc_MAP3K-like 203 452 - -
Phco4g02623 503 FunFam Serine/threonine-protein kinase isoform 1 186 280 - -
Phco4g02623 503 Gene3D Transferase(Phosphotransferase) domain 1 281 479 - -
Phco4g02623 503 MobiDBLite consensus disorder prediction 83 114 - -
Phco4g02623 503 FunFam serine/threonine-protein kinase HT1 281 474 - -
Phco4g02623 503 PRINTS Tyrosine kinase catalytic domain signature 423 445 IPR001245 GO:0004672|GO:0006468
Phco4g02623 503 PRINTS Tyrosine kinase catalytic domain signature 276 289 IPR001245 GO:0004672|GO:0006468
Phco4g02623 503 PRINTS Tyrosine kinase catalytic domain signature 314 332 IPR001245 GO:0004672|GO:0006468
Phco4g02623 503 PRINTS Tyrosine kinase catalytic domain signature 360 370 IPR001245 GO:0004672|GO:0006468
Phco4g02623 503 PRINTS Tyrosine kinase catalytic domain signature 379 401 IPR001245 GO:0004672|GO:0006468
Phco4g02623 503 SUPERFAMILY Protein kinase-like (PK-like) 183 452 IPR011009 -
Phco4g02623 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672|GO:0006468
Phco4g02623 503 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 69 461 - -
Phco4g02623 503 SMART serkin_6 196 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02623 503 MobiDBLite consensus disorder prediction 116 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02623 Phco-Chr4 47540907 47543951 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phco4g02623 PK_Tyr_Ser-Thr 1.5e-62 CL0016