Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02577 ATGGGTTTGAGTTCTAAGCAGGTTTCTAGCAGTGGACTTGATTGGAAACAAACCTTGTTGGAGGCTCAAGACTTGGAACTCCCAAAGCCTAATCTGATGAGGAAACAACAGCAGCAGCAGCAAACTCAGCCTTCAGAGTCTTTGAAGTGCCCAAGATGTGACTCTACCAACACCAAGTTCTGTTACTACAACAACTACAACAAGTCTCAGCCTCGCCATTTCTGCAGGGCTTGCAAGAGGCACTGGACTAAAGGCGGAACTCTACGAAATGTTCCAGTAGGTGGTGGAAGGAAGAACAAGAGGGTCAAAAAACCAAACACTCCAACACCATCTTCCACCACTGCCACCACCACCCCGACCACAGCCACCCCTTCTACTTGCACTGCCACTGTCACAAACTCAATTGGCAACATGGATGCTATGCTGGGTAGTAGCCACCTGACAATTCATACTCCTCTTGCAGATGATCAGAAAAACATGGCTTCCTCTCTCTACCAAGCTCTAATTCGTCCACCACCTTTGCTGCTACAACAGAATCTGATGAACGCGAGAAACTTAGACGGCAAAGATTTTGGTATTGGTATTGGTAATAATGGTATCTTCCCGAGTTCAACTTTGCCTCTTACTCATCAAAGCCAAAGCCTACTCTTCCCTTTCTCGACCTCGAGCAGTTCTTTTGACACCAACCCTTGTTCGGTGTCAACCTCTCTGAGATCATCCAATGTTTATAACTATGGGGAGGAGTTTAAAGCAGTGGAGGAATCAACCATCAACAGTACTGCTACTGTGCCTAGCACAGGTGGCACTAACACACAGCCATGGGAGATAGCAGCAACAGGTGGTCTTGGCTTGGGAACTTCAAACTATTGGAACTGGGAAGACTTTGATTCATTGGTCTCTACTGATCTAAAAGATCCTTGGGATGATTCTGACATCAAACCGTGA 945 0.4646 MGLSSKQVSSSGLDWKQTLLEAQDLELPKPNLMRKQQQQQQTQPSESLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVKKPNTPTPSSTTATTTPTTATPSTCTATVTNSIGNMDAMLGSSHLTIHTPLADDQKNMASSLYQALIRPPPLLLQQNLMNARNLDGKDFGIGIGNNGIFPSSTLPLTHQSQSLLFPFSTSSSSFDTNPCSVSTSLRSSNVYNYGEEFKAVEESTINSTATVPSTGGTNTQPWEIAATGGLGLGTSNYWNWEDFDSLVSTDLKDPWDDSDIKP 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02577 314 MobiDBLite consensus disorder prediction 26 49 - -
Phco4g02577 314 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 35 209 IPR045174 GO:0003700|GO:0006355
Phco4g02577 314 ProSitePatterns Zinc finger Dof-type signature. 50 86 IPR003851 GO:0003677|GO:0006355
Phco4g02577 314 ProSiteProfiles Zinc finger Dof-type profile. 48 102 IPR003851 GO:0003677|GO:0006355
Phco4g02577 314 MobiDBLite consensus disorder prediction 86 125 - -
Phco4g02577 314 MobiDBLite consensus disorder prediction 105 125 - -
Phco4g02577 314 MobiDBLite consensus disorder prediction 32 49 - -
Phco4g02577 314 Pfam Dof domain, zinc finger 47 100 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02577 Phco-Chr4 47102098 47103042 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phco4g02577 zf-Dof 1.4e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02577 4 47102098 47103042 Phco11g00382 11 2486895 2487731 PCT