Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02570 ATGGACAGCACCGATTCATCATCAGCGTCTCAGCACCCACACCTTCCTCCAGGCTTTCGCTTCCACCCCACCGACGAAGAACTTGTCGTTCACTACCTCAAGAGAAAAGCTTCTTCTACACCCCTTCCCGTCGCCATCATCGCCGACGTTGATCTCTACAAGTTCGACCCCTGGGAGCTCCCAAGTAAAGCAACTTTTGGTGAACAAGAGTGGTACTTTTTCAGTCCAAGGGATCGGAAATACCCAAATGGGGTGAGACCCAACAGAGCTGCTACTTCTGGGTATTGGAAGGCCACGGGAACTGACAAGCCTATACTAACATCTGATGGGCACCAGAAAGTTGGAGTTAAGAAAGCACTTGTTTTCTATGGTGGAAAGCCTCCAAAAGGGGTCAAAACCAATTGGATCATGCATGAGTATAGGCTTGTTCATGATTCCTTTAATTCAACCTCAAAACCCCCTCCTCTTGTTCCTCCAAACAAGAAAAATTCCCTCAGGCTGGATAATTGGGTTTTGTGCCGAATATACAAGAAAAGCAACAGCAGCATCCTAACAAGGCCACCCTTGATGGAGCAAGGAGAGGAGCTTTCAATGGAGAACATGCTTCCAGCGATGTCAATGGCTAATAATAATACTCAAAATTGTAAACCTCCATCTTCGAGAGGTACGAGTTATGGACCACTAGGACTTGAAAATGACGACAACTTCTTCGATGGAATCTTAGCCGTTGATCATCAGAGCATGCAAAGTGGTTCTGATTCTCACCTTTTCTCTCCAAACTCAAAGGGTGGCAACTTTCCTATGAAACGTGCACTCACATCACAACAACTTTGGAACGAGACAGGGTCCCCGGGGTCATCTTCTTCATGTAAGCGATTCCATGGTGATCTTAATAGTGGAAGCAGCAACGCTGAGGACAACGATTCCTTTGTTTCCTTGCTTAGCCAGTTTCCTCAGAACGCAACTTTTCAACCAAACGCAATTCATGGGTCCGTTGGGGATGGTGCGCAGAGACAGCAACAGTTTCAACTTCCTGGTATAGATTGGAACTGA 1053 0.4653 MDSTDSSSASQHPHLPPGFRFHPTDEELVVHYLKRKASSTPLPVAIIADVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGVRPNRAATSGYWKATGTDKPILTSDGHQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLVHDSFNSTSKPPPLVPPNKKNSLRLDNWVLCRIYKKSNSSILTRPPLMEQGEELSMENMLPAMSMANNNTQNCKPPSSRGTSYGPLGLENDDNFFDGILAVDHQSMQSGSDSHLFSPNSKGGNFPMKRALTSQQLWNETGSPGSSSSCKRFHGDLNSGSSNAEDNDSFVSLLSQFPQNATFQPNAIHGSVGDGAQRQQQFQLPGIDWN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02570 350 MobiDBLite consensus disorder prediction 1 21 - -
Phco4g02570 350 FunFam NAC transcription factor 56 24 183 - -
Phco4g02570 350 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Phco4g02570 350 Gene3D NAC domain 24 182 IPR036093 GO:0003677|GO:0006355
Phco4g02570 350 PANTHER NAC TRANSCRIPTION FACTOR 56 15 201 - -
Phco4g02570 350 ProSiteProfiles NAC domain profile. 15 178 IPR003441 GO:0003677|GO:0006355
Phco4g02570 350 SUPERFAMILY NAC domain 8 178 IPR036093 GO:0003677|GO:0006355
Phco4g02570 350 MobiDBLite consensus disorder prediction 278 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02570 Phco-Chr4 46986405 46987979 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco4g02570 NAM 9.5e-40 No_clan