Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02564 ATGGGTTGCTGGAATTCAGACTTGAATTTGCAAATTTTCATCTTTTCAATGTTGACTTTCAGTGCAACTTTCTGTATTGGGGACACTGATCCACTTGATGTTGCGGCAATCAATAGTTTGTATGTGGCTCTTGGCTCACCATCCCTTGAGGGGTGGAAAGCCATAGGAGGAGATCCATGCTTGGAACAATGGGAAGGTGTGAGTTGTGTCTTCTCCAACATAACTGCTTTGCGACTGGGAGGCATGAGTTTAAGTGGACAACTGGGAAGTAATTTGGATTTCCCATCCATCATAGAATTGGATCTTAGCAACAACCAGATTGGAGGGGCCATTCCATCCACTTTGTCCCCTACTTTAAAGAACTTGTCACTCGCAGCTAATCAATTAAATGGAAGCATTCCAGATGCCTTGTCCTCATTAACTCAATTGTCAGACTTGTCATTAAAAGATAACCATCTGAACGGACAAATTCCAGATGCATTTCTACAGTTCACTGGTTTGATGAATATGGATCTGTCTGGCAACAACTTGAGTGGTCAGCTGCCTCCCTCAATGGGGAATTTGTCATCTCTTATCACATTACATTTGCAGAACAATCAACTTTCTGGGACCCTTTTTGTTTTGCAGGACCTCCCTCTTCAGGATCTGAATATAGAGAACAATATATTTTCTGGGCCAATTCCTCCAGAGTTGTTGAGTATCCCCAATTTCAGAAAAGATGGGAATCCGTTTAATACTACTATCATTCCATCACCTCCGGCTGCTTCCCCTGCTCCCGTTGCTATGCCTCCTTCCCCAGAAATTTCACCTTGGAAAGTGGCAAATAATCCCTCTGCTACCATCATAAAAGCACCAATGCCTGCAATTGCTGAGAGGTCTTTCAGAACTAAGAAATTAGTTTGGATTGTTGGTGCCGGCTTTTTAATATTTATTGCATTAGGATTTTGTCTTCTAATGTTGTGGTGCTTTAAGAGAAGACCAGAGAACAAGAGTTATAAGAAACACAACATGAATGTGTATAAAAGATCTTTGCATAAACGTACAAGCAGCGACTCCCCTTTTGAAGCAACTGATGACGAGGAGAAAGGATGGGATTCAAAACTTCCACCCTTGCAGCCAGCACCACCATATCAACTCCCTATCATTCCTGAAGAGAATTTAATCATTAATCCAGCTATATTTGGCAAAGCAACCAAAAGACAAATTGTAACAAATTCCATCAAAGTTTATAGTGTTGCATCACTTCAGCAGTACACTAATAGTTTTTCCCAAGAAAATTATATTGGGGAAGGCATGCTTGGCCCTGTTTATAGGGCTGAACTCCCTGATGGAAAGTTACTGGCAGTTACGAAGCTGAATGCTACTGCTTCAATGGGGCAAAATCATGAACAGTTTCTTCAATTAGTTTCCAGTGTCTCCAAAATTCAACATGCTAATATTGTGAAGCTTATGGGCTACTGTGCCGAGTATAGCCTACACCTACTTGTATATGAGTATTGCAGTAATGGCACCCTTCATGATGCGTTGCATACAGATGATAAACTTCAGATTAACCTTTCATGGGATGATCGCATTCAAGTGTCACTTGGAGCGGCAAGAGCTTTAGAGTATTTGCATGAGTACTTTCAGCCACCTATTGTGCACCGAAACTTTACATCTGCTAATGTACTCCTCAATGACAAGTTGGAAGTGCAGGTCTGTGATTGTGGATTAGGTTCTTTACTATCTTCCGGCTCTGCTAGTCAGTTGACAAGGCACCAACTCACAGCTAATGGTTACAGTGCTCCAGAATATGAGAAAGGAAGTTATACACTGCAAAGTGATGTCTTTAGCTTTGGAGTTGTAATGCTAGAACTCCTCACTGGACGAAAATCCTATGACAGCTCACTGCCTCGTGCAGAGCAGTTTTTGGTGAGATGGGCAGTCCCTCAACTCCATGACATAGATGCATTGTCAAAAATGGTTGACCCCTCTTTAAATGGAGAATATCCTAAGAAATCCTTGTCACGTTTTGCAGACATTATTTCTTCATGTATACAGCATGAACCTGAATTTCGACCAGCAATGTCAGAAATTGTTCAGGATCTCTTGCGAATGATGTAG 2103 0.4156 MGCWNSDLNLQIFIFSMLTFSATFCIGDTDPLDVAAINSLYVALGSPSLEGWKAIGGDPCLEQWEGVSCVFSNITALRLGGMSLSGQLGSNLDFPSIIELDLSNNQIGGAIPSTLSPTLKNLSLAANQLNGSIPDALSSLTQLSDLSLKDNHLNGQIPDAFLQFTGLMNMDLSGNNLSGQLPPSMGNLSSLITLHLQNNQLSGTLFVLQDLPLQDLNIENNIFSGPIPPELLSIPNFRKDGNPFNTTIIPSPPAASPAPVAMPPSPEISPWKVANNPSATIIKAPMPAIAERSFRTKKLVWIVGAGFLIFIALGFCLLMLWCFKRRPENKSYKKHNMNVYKRSLHKRTSSDSPFEATDDEEKGWDSKLPPLQPAPPYQLPIIPEENLIINPAIFGKATKRQIVTNSIKVYSVASLQQYTNSFSQENYIGEGMLGPVYRAELPDGKLLAVTKLNATASMGQNHEQFLQLVSSVSKIQHANIVKLMGYCAEYSLHLLVYEYCSNGTLHDALHTDDKLQINLSWDDRIQVSLGAARALEYLHEYFQPPIVHRNFTSANVLLNDKLEVQVCDCGLGSLLSSGSASQLTRHQLTANGYSAPEYEKGSYTLQSDVFSFGVVMLELLTGRKSYDSSLPRAEQFLVRWAVPQLHDIDALSKMVDPSLNGEYPKKSLSRFADIISSCIQHEPEFRPAMSEIVQDLLRMM 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02564 700 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 500 700 - -
Phco4g02564 700 Pfam Protein tyrosine and serine/threonine kinase 425 696 IPR001245 GO:0004672|GO:0006468
Phco4g02564 700 MobiDBLite consensus disorder prediction 348 369 - -
Phco4g02564 700 SUPERFAMILY Protein kinase-like (PK-like) 403 696 IPR011009 -
Phco4g02564 700 SUPERFAMILY L domain-like 37 236 - -
Phco4g02564 700 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 30 255 - -
Phco4g02564 700 Gene3D Transferase(Phosphotransferase) domain 1 500 700 - -
Phco4g02564 700 MobiDBLite consensus disorder prediction 348 366 - -
Phco4g02564 700 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 393 499 - -
Phco4g02564 700 Gene3D Phosphorylase Kinase; domain 1 391 499 - -
Phco4g02564 700 ProSiteProfiles Protein kinase domain profile. 422 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02564 700 Pfam Leucine rich repeat 117 177 IPR001611 GO:0005515
Phco4g02564 700 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 73 696 - -
Phco4g02564 700 Gene3D Ribonuclease Inhibitor 33 251 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02564 Phco-Chr4 46893909 46900744 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Phco4g02564 PK_Tyr_Ser-Thr 7.3e-43 CL0016