Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02562 ATGACAAAAGTACCAATCCACGTTACCCCACGATCCTCTGTTGAGAAAAATAACTGGGCAAAATCGAGTTTGCTTCAATCTCGAACGTACACGTGTACGGGGATGGGAGCAGAGTTGGTGATGACGTGGAACACTTGGGAGGAGCTTCTCCTCGGTGGAGCTATTCTCCGGCACGGGACCCGAGATTGGACCGTCGTTGCCGCGGAGCTCAAGACCCGAACCGTTTCGCCATTTATTTTCACTCCCGAGGTTTGTAAAGCCAAATATGAAGAGTTGCGACAGCAGTATTCTGGGTGCATGGCTTGGTTTGAGGAGCTTAAGAAGAAAAGAGTGGCAGAGCTTAAGAGAGACTTGGAGCTATCTGAAGAATTAATTGGGTCCCTTGAGTTGAAGCTTGAATCCCTTAAGACTGGAATGGATGAGAAAAGAGTTGATTACCATGTTGATAATGGCTCAGTTGAACCTGAATTACATCTTCCATTGGAGAAATTGGATAGAGTTGTTCCTTCCGCAAAAGAGATGTCAAAGGATGGACTATCTGCTGGGAGTTTCACACATGAAACCCAGACAAACTGGTCTCATGAATGTAAGGTTCCAGCAATGTCATGTGAAGATGTGGAGACCAAGCCTGAAGTTTCAGGGTCTACTGAACAGGAGAAAGTTTTGAATGTAGATAAGTCGACTCACACTATATATGAAGGACAGGGAGGGTGTTTGAAAAAACGAAGAGGGAAGAGAAAGAGGAAGGATTGTGGCAGAAATATTAATGAAGCCAGTGTAAGAGAAAGTGATTTATCAGCTGATGTGTGTAAAGAAAGTTCTACCAGCAACTGTGATGAGATCGCAAAATCTTCTGGTATGAAGGAGGCAAAAGCAAACTTGAAAAAGGATGAAATAAAAGATTTGATGGAGCTCTTGGATTCTTTTTTGTTAGTTCAAGGTGCTTCTGCCTTCTGTCGCAGGCATGATAGCCAGAAACGAGGAAGATACAAGAAAACGATTCGGCAACACATGGACTTTGACACTATAAGGTCTAGAATCAACAACGGAACAATCAAGTCCATGCTGGAACTTATAAGAGACTTGCTACTATTGACCAACAATGCTATATTATTCTACTCCAAGATCACTCGTGAATACAAAATTGCTCTAAAACTGAGAGACCTTGCCATAAAAACATCGGCAGAGAAACTCAAGTTTTTGAGCAGCAGCAATGCCTCAACATCATCACCTGTGCCTGATCCTCAAGTGAAAGTCAGAAGCATGACTACATCACGTGTGAATGATCCTCCAGTGAAAGCCAGAAGCATTACCACATCACCTGTGCATGATCCTTCAGTGAAAGTCAGAAGCATGCGCCCGGGTAACCGCAAGATTGTTGCAAAGGTAGCTGGTGGCAGCACCTCTGCCGAAAGGGTCTCACTTAGAGCTAAAAAAGAAGCTAATAAAGTAGATTCTCCATCTTCAGTGGAATCCTTACCCATCAAGAAGGCTTTTGGTGGTAGAACAAAAAAAGTTGTACTTGAAAGTGCAGGTCAGAGACATGCAACACCAAGGAAGGGAAAGAAAAGAGGGAAAACAAAGTGA 1587 0.4348 MTKVPIHVTPRSSVEKNNWAKSSLLQSRTYTCTGMGAELVMTWNTWEELLLGGAILRHGTRDWTVVAAELKTRTVSPFIFTPEVCKAKYEELRQQYSGCMAWFEELKKKRVAELKRDLELSEELIGSLELKLESLKTGMDEKRVDYHVDNGSVEPELHLPLEKLDRVVPSAKEMSKDGLSAGSFTHETQTNWSHECKVPAMSCEDVETKPEVSGSTEQEKVLNVDKSTHTIYEGQGGCLKKRRGKRKRKDCGRNINEASVRESDLSADVCKESSTSNCDEIAKSSGMKEAKANLKKDEIKDLMELLDSFLLVQGASAFCRRHDSQKRGRYKKTIRQHMDFDTIRSRINNGTIKSMLELIRDLLLLTNNAILFYSKITREYKIALKLRDLAIKTSAEKLKFLSSSNASTSSPVPDPQVKVRSMTTSRVNDPPVKARSITTSPVHDPSVKVRSMRPGNRKIVAKVAGGSTSAERVSLRAKKEANKVDSPSSVESLPIKKAFGGRTKKVVLESAGQRHATPRKGKKRGKTK 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02562 528 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 41 190 - -
Phco4g02562 528 Pfam Bromodomain 305 384 IPR001487 GO:0005515
Phco4g02562 528 Coils Coil 111 131 - -
Phco4g02562 528 SUPERFAMILY Bromodomain 289 398 IPR036427 GO:0005515
Phco4g02562 528 CDD SANT 42 92 IPR001005 -
Phco4g02562 528 SMART bromo_6 295 399 IPR001487 GO:0005515
Phco4g02562 528 MobiDBLite consensus disorder prediction 402 445 - -
Phco4g02562 528 ProSiteProfiles Bromodomain profile. 318 380 IPR001487 GO:0005515
Phco4g02562 528 MobiDBLite consensus disorder prediction 506 528 - -
Phco4g02562 528 CDD Bromodomain 298 392 - -
Phco4g02562 528 Gene3D - 263 408 IPR036427 GO:0005515
Phco4g02562 528 MobiDBLite consensus disorder prediction 402 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02562 Phco-Chr4 46865845 46871231 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02562 4 46865845 46871231 Phco11g00360 11 2325614 2330661 PCT