Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02519 ATGGGAGGTTTCACTGTCCTCCTCTCATTCTTCCTTTTATGCTTCCCCACACTTTCCATCTCCACACACACCTTAACAAAATCCCAATTCCTCCAAACCAACCAAACCCTCCTCTCCCCAAATGCAATTTTCGAGCTGGGTTTCTTTTCCTACACCAATTCCACCTGGTACTTGGCCATATGGTACAAAACCATCCACGACACTGATAAAACTGTGGTGTGGGTGGCAAATCGTGACACCCCACTTCAAAATTCCATCGGCTTTCTCAAAATTGACGACAAGGGAAACCTCCTCATTGTAAACCAATCCAACAAACCCGTGTGGTCCTCCAACCACACCACACCAATAACCAACCCAGTTCTTCAGCTCTTGGATTCCGGGAACCTGGTTCTTCGAGAAGAAAACGAGAATGACCCCACAAGGTTCCTCTGGCAGAGCTTTGATTACCCGACAGATACCTTGTTACCCGGCATGAAACTAGAGTGGAACTTCGACACGGGCATGGAGAAACACATAACCTCGTGGAGGGTCACAAACGAAGACCCTTCAAGCGGGGATTTTTCCTTCAAGCTAGATTGCCGTGGCCTCCCGGAAATATTCCTCTGGAACAAGGACCAGATAATCTACCGAAGTGGACCTTGGAATGGCGACAGATTCAGCGGGGTACCCGAGATGCAACCCGTCACCGATTCCATTAAGTTCACGTTCTTTGCGGATCAGCACCAAGTATACTACACATTCTCAATTGCGAACAACTCCTTGTTCTCAAGACTCTCTGTGAACTCAGTCGGGCAACTCCAACGCCTCACGTGGATACAAAGCACCCAGGCTTGGAACAAATTCTGGTACGCTCCGAAAGACCAATGCGACAACTACCGCGAGTGCGGTGCCTACGGAGTCTGTGACATCAACGTGTCACCGGTGTGTCAGTGTATCGTAGGGTTCCGCCCCAGGAACCAGCAGGCGTGGAATTTGCGAGATGGGTCTAATGGGTGTGTGAGGAAGACGGGATTATCGTGTGGGAGTGACAGGTTTCTGTATTTGCAGAGGGTGAAATTGCCAGATACTACGTCGGTGTTCGTGAACAGGAGCATGGGGCTGGTGGAGTGTGGGGATTTGTGCCAGAGGAATTGTTCGTGCACTGCTTATGCCAATATTGAGATTAGGAATGGAGGCAGTGGGTGCGTGATGTGGGTTGGGGAGCTCTTGGACGTGAGACGCTACCCTTCTGGAGGGCAAGATCTTTATGTCAGATTGGCGGCTTCTGATGTAGGGGTAGAAGGTGATTCTAGCAAGAGAAGTGATACAGTAAGGGATATAGGCATTGTCGTTGGTGTTGCAGGTTTTATACTATTGGCATTGGGTATCTTTATCTTGTGGAAGAAGAGGAAATTGCAACCTATATTGAAAGGGAAGACAGAAAAAAGAGGTTTTTCGGAAAGAAGTCAGGACTTTTTAATGAATGAGGGAGTGTTATCAAGTGACAGAGAACAGTCCGGTGAAAGTAACATGGACGACCTAGAGTTGCCATTGTTCGATTTTAACACCATAACAATGGCTACAAACAACTTCTCTGAAGAAAATAAACTTGGACAAGGAGGGTTTGGTAGTGTTTACAAAGGCAGGTTGAAGGAAGGTCAGGACATTGCTGTGAAGAGATTATCAAAAACTTCTGGCCAAGGAATTGAGGAGTTCAAGAATGAGGTCAAGTTAATTGTCAAGCTTCAACATCGAAATCTAGTTCGATTGCTTGGTTGCAGCATTCAGATGGATGAGAAGATGTTGGTCTACGAATACATGGAAAATAGAAGCCTTGATGCAATTTTGTTTGATAAGGCAAAAAAATCCTCACTTGACTGGCAAATGCGCTTCAACATTATATGTGGCATTGCTAGAGGGCTTCTATATTTGCACCAAGATTCCAGATTTAGGATCATACATAGGGATCTTAAGGCAAGCAACATTCTTCTTGACAAAGAGATGAACCCAAAGATATCAGACTTTGGTATGGCTAGAATTTTTGGTACGGATCAAATAGAAGCAAATACGATGAGAATTGTGGGAACATATGGCTACATGTCTCCTGAATATGCTATGGATGGAATCTTTTCAGTAAAATCTGATGTTTTTAGTTTTGGGGTTCTTGTGCTGGAGATAGTAAGTGGAAAGAAAAACAGAGGATTCTATTTGGCAAACAAAGAATTGAATCTTCTGGGGCATGCGTGGAAGTTGTGGATAGAAGGAAATGCGTGGGAACTGAGTGATTCGTCTATTGACACTTCATACTCAGCATCAGAAGTTCAAAGATGCATTCAAGTGGGTCTCTTATGCGTGCAAGAGCGTGCAGAAGATAGGCCAACAATGTCTTCAGTGGTCTTGATGCTGAGTAGTGACACTGCATCAATGGCACAACCCAAAAACCCTGGGTTTTGTCTAGGAACGAATCCTATGGAAACTGAATCTTCTTCAAGTAAACAAGAAGAATCATGCACTGTGAACCAAGTCACTGTCACAATGCTAGATGCTAGGTAG 2532 0.451 MGGFTVLLSFFLLCFPTLSISTHTLTKSQFLQTNQTLLSPNAIFELGFFSYTNSTWYLAIWYKTIHDTDKTVVWVANRDTPLQNSIGFLKIDDKGNLLIVNQSNKPVWSSNHTTPITNPVLQLLDSGNLVLREENENDPTRFLWQSFDYPTDTLLPGMKLEWNFDTGMEKHITSWRVTNEDPSSGDFSFKLDCRGLPEIFLWNKDQIIYRSGPWNGDRFSGVPEMQPVTDSIKFTFFADQHQVYYTFSIANNSLFSRLSVNSVGQLQRLTWIQSTQAWNKFWYAPKDQCDNYRECGAYGVCDINVSPVCQCIVGFRPRNQQAWNLRDGSNGCVRKTGLSCGSDRFLYLQRVKLPDTTSVFVNRSMGLVECGDLCQRNCSCTAYANIEIRNGGSGCVMWVGELLDVRRYPSGGQDLYVRLAASDVGVEGDSSKRSDTVRDIGIVVGVAGFILLALGIFILWKKRKLQPILKGKTEKRGFSERSQDFLMNEGVLSSDREQSGESNMDDLELPLFDFNTITMATNNFSEENKLGQGGFGSVYKGRLKEGQDIAVKRLSKTSGQGIEEFKNEVKLIVKLQHRNLVRLLGCSIQMDEKMLVYEYMENRSLDAILFDKAKKSSLDWQMRFNIICGIARGLLYLHQDSRFRIIHRDLKASNILLDKEMNPKISDFGMARIFGTDQIEANTMRIVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVLEIVSGKKNRGFYLANKELNLLGHAWKLWIEGNAWELSDSSIDTSYSASEVQRCIQVGLLCVQERAEDRPTMSSVVLMLSSDTASMAQPKNPGFCLGTNPMETESSSSKQEESCTVNQVTVTMLDAR 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02519 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 490 599 - -
Phco4g02519 843 CDD PAN_AP_plant 338 420 - -
Phco4g02519 843 CDD B_lectin 28 150 IPR001480 -
Phco4g02519 843 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524
Phco4g02519 843 ProSiteProfiles Bulb-type lectin domain profile. 22 144 IPR001480 -
Phco4g02519 843 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 786 - -
Phco4g02519 843 Pfam Receptor serine/threonine kinase 480 514 IPR022126 GO:0004674
Phco4g02519 843 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Phco4g02519 843 Pfam Domain of unknown function (DUF3403) 797 843 IPR021820 GO:0004674
Phco4g02519 843 SMART blect_4 28 150 IPR001480 -
Phco4g02519 843 SUPERFAMILY Protein kinase-like (PK-like) 509 823 IPR011009 -
Phco4g02519 843 Gene3D Transferase(Phosphotransferase) domain 1 600 807 - -
Phco4g02519 843 PIRSF SRK 2 843 IPR024171 GO:0004674
Phco4g02519 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Phco4g02519 843 ProSiteProfiles Protein kinase domain profile. 524 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02519 843 Pfam D-mannose binding lectin 71 176 IPR001480 -
Phco4g02519 843 Gene3D - 18 147 IPR036426 -
Phco4g02519 843 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 216 IPR036426 -
Phco4g02519 843 SMART serkin_6 524 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02519 843 Gene3D Phosphorylase Kinase; domain 1 498 599 - -
Phco4g02519 843 CDD STKc_IRAK 530 795 - -
Phco4g02519 843 SMART ntp_6 340 419 IPR003609 -
Phco4g02519 843 Pfam Protein tyrosine and serine/threonine kinase 527 793 IPR001245 GO:0004672|GO:0006468
Phco4g02519 843 ProSiteProfiles PAN/Apple domain profile. 340 420 IPR003609 -
Phco4g02519 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 600 803 - -
Phco4g02519 843 Pfam PAN-like domain 340 405 IPR003609 -
Phco4g02519 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02519 Phco-Chr4 46395639 46403081 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco4g02519 PK_Tyr_Ser-Thr 2.9e-48 CL0016