Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02490 ATGGCTTCTCAAATGAAGAGGGATATTTTCATCCATGTTTTCACGTGTTCTTTGCTGAGTTCTCTTATGGTAGGTAATGGGGTTGCAAGCGATATCTCCTGCTTAAAATCCATTAAGGATTCCTTGGAAGATCCATTTAATCACTTATCAAGCTGGAGCTTCCACAACCAAACCGAAGGTTTCATATGCATTTTTGTTGGTGTTTCATGCTGGCATCATGGTGAGAATAAAGTGTTAAGTATCTCACTAGAAAACATGGGGTTGAAGGGTGAGTTTCCACTGGGCATTAGGAATTGCTTGTCATTAACAGCCTTAAACCTTTCGCACAACCACCTCACAGGACCCATCCCCTCGGATATATGCACCTTAATCCCTTTTGCTACCTCCATAGATCTCTCACATAACAGATTTAATGGGAATATTCCACCTACTTTGGCTCACTGCACTTATCTCAATTCTCTTAGGCTTGATAACAACAATTTAAGTGGTCACATCCCTCAAGAACTGGGGCGGCTTCCCATGATCAGATCAATTTCTTTTGCCCATAATTATTTATCAGGGTCGGTGCCTCTGTTCTTCCCACACTCAACTGCTATTGATTACGCCAATAATGGAGAGCTTTGTGGTGGGCCTTTCTCACCATGCTCATTGGACACCTCCAATGATTTCCCTCAATCGTTCAAGCAGGGTCTTGCTATAGGCTATGCTTTTTCAGTTACTTCTGTTATTGTCATTTACATCTCCTACTGTGCACCTTGGGAACAATCAAACCATGAAAGAAGCAAGCACCGCAACAGGGCTAAAGAATTAGGCAGAATTTTTTGGTCCATTGCTGGGAGAAAGACACCTACTCAAGCTCAAGCTGAACACGAATTGCAACCTCTGCAGTTGCAAGAGAAAGTCATCAGAGAGATATGTGTAACAGAGAGAATGAAGTCCACAATGAGGTTGAACGAAGTAAGAGAGGCAACTGACTGCTTTTCTATAGACAAGGCCATTGGGATGGGAAAAATTGGAATAATGTATGAGGGGAGGCTACCCAATGGTTGGATCCTTGCCATTAAGAAACTATTCGATTCCAAACAATACAAGAGACAGTTTCTTTTGGAAATAAGAATTCTGGGTAAGTACAGACATAGAAATATAGTTCCCCTACTTGGGTTCTGTGTTGAAGGAAATGAAAGGATTTTGGTATACCAATTCATGTCAAATGGAAGGCTTTCAAAATGGTTGCGTCCTTTAGAAGGTGAAGTTACATTGAAATGGCCTGAGAGGAGCAAAGTAGCACTTGGGGTAGCAAGAGCCTTATCCTGGCTCCACCATATATGCAACTTGCATGTTGTGCACCTCAATATAAGTTCGGAGTGTGTGTTACTAGATAAGAATTTTGAACCAAAACTGTCCAACTTTGGAGGGGCCAAGTTTTTGAATCCCAACATTGAGGACGATGCAAGCACAATAATGTTTTATGTGAGTGATGGGAAGAAGGATGTCTATGACTTTGGTAGTTTGCTCCTTGAGCTAATCACAGGGAAAACATTGAAGGAGTTGTCGTGTTCATTCAATACTACTACAACTAACCTATCTAGAAACCCTTCAAACTTTATTAACGCAATCGATGAATCTCTGATAGGGGAAGGTTTCGAAAACGAGGTCTACACTCTCATCAAAGTTGCATGCAAATGTGTTCAGCCTTTTGCAGATGAAAGGCCAACGATGCTGGAAGTTTATGACACTTTGATGGATATTTGTGGGCAACGACATAGATATAGTGATGGTTCTCACGCACTCAACCTTGCTGTTTCTTCTGATAGTATACACGAAATTCCTGACCTATAA 1839 0.4138 MASQMKRDIFIHVFTCSLLSSLMVGNGVASDISCLKSIKDSLEDPFNHLSSWSFHNQTEGFICIFVGVSCWHHGENKVLSISLENMGLKGEFPLGIRNCLSLTALNLSHNHLTGPIPSDICTLIPFATSIDLSHNRFNGNIPPTLAHCTYLNSLRLDNNNLSGHIPQELGRLPMIRSISFAHNYLSGSVPLFFPHSTAIDYANNGELCGGPFSPCSLDTSNDFPQSFKQGLAIGYAFSVTSVIVIYISYCAPWEQSNHERSKHRNRAKELGRIFWSIAGRKTPTQAQAEHELQPLQLQEKVIREICVTERMKSTMRLNEVREATDCFSIDKAIGMGKIGIMYEGRLPNGWILAIKKLFDSKQYKRQFLLEIRILGKYRHRNIVPLLGFCVEGNERILVYQFMSNGRLSKWLRPLEGEVTLKWPERSKVALGVARALSWLHHICNLHVVHLNISSECVLLDKNFEPKLSNFGGAKFLNPNIEDDASTIMFYVSDGKKDVYDFGSLLLELITGKTLKELSCSFNTTTTNLSRNPSNFINAIDESLIGEGFENEVYTLIKVACKCVQPFADERPTMLEVYDTLMDICGQRHRYSDGSHALNLAVSSDSIHEIPDL 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02490 612 Gene3D Phosphorylase Kinase; domain 1 288 401 - -
Phco4g02490 612 SUPERFAMILY Protein kinase-like (PK-like) 311 580 IPR011009 -
Phco4g02490 612 Gene3D Ribonuclease Inhibitor 28 215 IPR032675 -
Phco4g02490 612 ProSiteProfiles Protein kinase domain profile. 327 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02490 612 Pfam Protein kinase domain 328 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02490 612 Gene3D Transferase(Phosphotransferase) domain 1 402 599 - -
Phco4g02490 612 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Phco4g02490 612 FunFam Nuclear pore complex protein NUP107 28 191 - -
Phco4g02490 612 SUPERFAMILY L domain-like 29 199 - -
Phco4g02490 612 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 34 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02490 Phco-Chr4 46084672 46087568 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Phco4g02490 Pkinase 1.1e-21 CL0016