Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02461 ATGGCTTGGTGGCATAATATTGTTCATAATCCAATTCTTTTCTGGCATGCAATGATAACAATTTTTATCCACCAAATAATCCCTCTTGCAAACTCACTATCCTTTTATTACCCCAACTTTAAGAATGGTGATGTAAAATGGGAAGGGGATGCTTCTATTCTAAAAGGAGCTATCCAAGTCACGTCCAACACCATAGACCAAAACAACAATTACAGTGTTGGGAGAGTCACAAGTTATGAACAGATGCTCCTCTGGGATATGAAGTCTGGAAAGCTTGCGGATTTCACTACCAAATTTTCCTTTGTTATTTTTTCAGAGAAGAGTTACTATGGAGATGGAATGTCATTCTTCCTAGCTGATCCTAATCTCCCACTTCTAAAGGATATTACAGAAGGAGGTGGTCTTGGACTTGTGGATGGCGAACAAGTATTGAATTCAACTCAACACCCGTTTGTAGCAGTGGAGTTCGACACCTTCCACAACAAATTATGGGACCCTCCAGGTGGCACTCATGTAGGTTTGAATTTCAACTCTATGAAGTCCAACATAACTAAGTCATGGTTGACAGATGTTCAAATTTGGAATGTTTATAATTGCAGCATTAAGTACAATTCAAGTACTCTAAATTTGAGCGTTTCATTCACAATGTACAATGATAGTAAACCAGTTGAAGAATACGTTTCATACAAGGTTGATTTGAGAGATCACTTACCAGGGAGGGTTATTCTTGGTTTTTCTGCTGCAACAGGGAGATTGTATGAGGTGCATACATTGAGATCATGGTCATTTAGTTCAAATCTACAAAGTGATGAGAACACAAATGAGATAAGTCCAGAAGCAGTTCCACCAGATTCCGATCTTATTTCTGAAAAAGGAAAGAAAATAGAATTGAGGGTAGGGCTTGGAATTGGTTTAGGCTTGGTTTTGTGTTTGTCAGGTCTGATTTTTACTTTATTGTGGAAGAGGAGTAGAGGTAGAAAAAAAGAGTTAGTTTTTCATCTCAATATGGGTGATGAATTCCCAAAGGGCACTGGACCTAAGAGCTTTTCCTATAATGAGCTAGCAAGTGCTACAAACAAATTTGCCGAGTCTGAGAAGCTGGGGCAAGGTGGTTTTGGTGGTGTGTATAAAGGTTATTTGAAAGACATAAAGTCCTATGTTGCTATCAAGAGAATATCAAGAGAGTCTAGACAGGGAATGAAGGAGTACGTGACAGAAGTGAAGGTAATAAGCCAATTGAGACATAGGAATTTAGTACAACTTATTGGTTGGTGTCATGAGAAGAATGACTTTATCCTCGTATACGAGTTCATGCCAAATGGAAGCTTAGACTCTCATCTGTATGAAGTGAAAAGCTTCTTAACTTGGACAGTAAGGTATAATATAGCTTTGGGCTTGGCTTCAGCATTGCTTTACTTACAAGAAGAGTGGGAGCAGTGTGTGATTCATAGGGATATTAAATCAAGCAACATAATGCTGGATTCAAGTTTCAATGCTAAGCTTGGTGATTTCGGTTTGGCTAGGCTAGTGGACCATGAGAAAGGATCACAAACCACACTTATAGCCGGGACTAGGGGCTATATTGCTCCTGAATATTTCACTTCAGGAAAGGCTACTAAGGAATCTGATATATACAGCTTTGGGGTTGTGTTATTGGAGATAACTAGTGGAAGAAAATCAGTTGAACTAGAAGCTGAGGAGGGTCAAATAACTCTAGTGGAGTGGGTTTGGAAGCTATATGGATTGGGGAGGTTACATGAAGCAGCTGACCCAAAGTTATGTGGAGAATTTGATGAGAAGCAAATGAAACGTTTAGTGGTTGTTGGACTTTGGTGTGTTCATCCAGATTACTCATTCAGGCCTTCTATAAGGCAAGTGATTCAGGTCCTTAAATTTGATTCTCCTCTACCCATTCTCCCAGAAATGATGCCTGTGCCAACCTATCTTCCTCCAACAATAAAAGCACTTTTTTCTTCAGTTTCATCCTTCCTTTGGGAAACAAGTTAG 2007 0.3931 MAWWHNIVHNPILFWHAMITIFIHQIIPLANSLSFYYPNFKNGDVKWEGDASILKGAIQVTSNTIDQNNNYSVGRVTSYEQMLLWDMKSGKLADFTTKFSFVIFSEKSYYGDGMSFFLADPNLPLLKDITEGGGLGLVDGEQVLNSTQHPFVAVEFDTFHNKLWDPPGGTHVGLNFNSMKSNITKSWLTDVQIWNVYNCSIKYNSSTLNLSVSFTMYNDSKPVEEYVSYKVDLRDHLPGRVILGFSAATGRLYEVHTLRSWSFSSNLQSDENTNEISPEAVPPDSDLISEKGKKIELRVGLGIGLGLVLCLSGLIFTLLWKRSRGRKKELVFHLNMGDEFPKGTGPKSFSYNELASATNKFAESEKLGQGGFGGVYKGYLKDIKSYVAIKRISRESRQGMKEYVTEVKVISQLRHRNLVQLIGWCHEKNDFILVYEFMPNGSLDSHLYEVKSFLTWTVRYNIALGLASALLYLQEEWEQCVIHRDIKSSNIMLDSSFNAKLGDFGLARLVDHEKGSQTTLIAGTRGYIAPEYFTSGKATKESDIYSFGVVLLEITSGRKSVELEAEEGQITLVEWVWKLYGLGRLHEAADPKLCGEFDEKQMKRLVVVGLWCVHPDYSFRPSIRQVIQVLKFDSPLPILPEMMPVPTYLPPTIKALFSSVSSFLWETS 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02461 668 ProSitePatterns Protein kinases ATP-binding region signature. 367 390 IPR017441 GO:0005524
Phco4g02461 668 PANTHER - 59 632 - -
Phco4g02461 668 ProSitePatterns Legume lectins beta-chain signature. 152 158 IPR019825 -
Phco4g02461 668 Gene3D Phosphorylase Kinase; domain 1 346 437 - -
Phco4g02461 668 FunFam Lectin-domain containing receptor kinase A4.3 438 650 - -
Phco4g02461 668 ProSiteProfiles Protein kinase domain profile. 361 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02461 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Phco4g02461 668 Pfam Protein kinase domain 362 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02461 668 SMART serkin_6 361 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02461 668 CDD lectin_legume_LecRK_Arcelin_ConA 33 267 IPR001220 GO:0030246
Phco4g02461 668 SUPERFAMILY Protein kinase-like (PK-like) 345 653 IPR011009 -
Phco4g02461 668 Pfam Legume lectin domain 32 274 IPR001220 GO:0030246
Phco4g02461 668 FunFam L-type lectin-domain containing receptor kinase IX.1 31 276 - -
Phco4g02461 668 Gene3D Transferase(Phosphotransferase) domain 1 438 649 - -
Phco4g02461 668 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 273 IPR013320 -
Phco4g02461 668 FunFam L-type lectin-domain containing receptor kinase IX.1 346 437 - -
Phco4g02461 668 CDD STKc_IRAK 367 631 - -
Phco4g02461 668 Gene3D - 30 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02461 Phco-Chr4 45734713 45736719 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco4g02461 Pkinase 1.4e-49 CL0016