Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02459 ATGCATATAATTTATCACACAACTTACAATGTGTGTGAGACTTCAAAAAAGATCAAACTCAACTCTCACTTACCAATGGCTGGTTATGGATTACTGTTCTTGTTCATCTTAATCATCAACATTGCAATTACAAATGCTCACACTCAGTCTCAGGCTTTTGAGCATCCCAACTTCAGTTCAACTTATATAAAGCAGCTTAAGCTAGAAGGGAGTGCTTATACCTCAGGTTCTGCTATCCAACTCACAGCGACCGCAATGAACCCAAAGAACTGGTTTGGGACCGTAGGGCGAGTCACGCATCCTGAGCAAATAAACCTTAGGGACAACAATTCAAATGAACCAAGAGACTTCATTACCAACTTTTCCTTTGTTGTTTCCTCAAATAAGAGTGTTTATGCAGATGGTTTGGCATTCTTCCTTGCAAGCCCAAATCTGCCTTCCACAGAGACATTACAGCTAAGAGGAGGAAGTCTCGGCGTTGGCCTTACGGATGGTTACCAAGAGCTTAGCATGACAGGTTATCGATTCCTGGCAGTGGAGTTTGACACTTTCACAAACCCGTGGGACCCAATTGGCCCTCATGTAGGCATAAATATCAATAACATGAACTCTAAAATTCTTGAGAAATGGTGGATGGATATTACACACAGAAAAGTGTGTAACTGTAGTATTGTCTACGATTCTAGGAACAAAATTTTGAATGTCTCTTACACTGGATACAAATTCAGGGCTGGGAAAGTGAGAAAGATTACACAACACCTTTCATACCCTATTGATATAAGGCAGCAATTACCAGACTCGGTTATTGTTGGCATATCAGCTGCAACTGGAAAATTTTTTGAGGAACATACCTTGCTCTCATGGTCGTTTAGCGCAACCCCATCAAGTAAGGACGATCCGGAGAAGGCAAGGAAGTCTGTCATCATAAAATTATTGGAGGGAATAGGAATTGGTGCTGGTATGTTTTTGATTTTGTTAGGGTTGGTTCGGATTTCATTAGGGATGATGACCAAGGGAAAAGAAATAGGTCACACTTCAGAAGCCACTTCTGATCCAAAGATGGATGATGAATTCCAAATGAGCGCTGGACCTAAGAAAATTAGTTATCATGAATTGGCAACTGCAACCAACAACTTTGATGAGATGAATAAGCTTGGGCAAGGAGGTTTTGGTGGTGTTTATAAAGGCTATTTCAAAGACTCCAACACCTATGCTGCTATAAAGAGGATATCAGCAAATTCTAAGCAGGGTGTCAAACAATACAAAGCAGAAGTGACGATCATTAGCCAATTGAGGCACAAGAATTTGGTGAAACTCACTGGTTGGTGCCACAAGAAGAATGATTTTCTCTTGATATACGAGTACATGGAAAATGGCAGCTTAGACTCTCACCTTTTTCGGGGAGAAAGTATATTGTCCTGGCAAGTGAGGTACAATATAGCCTTGGGCTTGGCCTCAGCATTGCTTTACCTACAAGAAGAATGGGAGAAATGTGTGCTTCATAGGGACATCAAATCAAGCAACATAATATTGGACTCTAACTTCAATCCCAAGCTTGGTGACTTTGGCCTAGCTAGGCTGGTGGATCATGATAAAGGGTCAGAAACCACAGAAGTGGCTGGGACCATGGGTTACTTAGCTCCTGAATACATGAACACAGGCCATGCTCGAAAGGAATCTGACATATTCAGTTTTGGGGTTGTTGTGTTGGAGATAGCCACCGGAAGAAAAGCCATTCACCACAAACACATGGAGGGTGAGGTATCAGTGGTTGAGTGGGTGTGGGAGCTCTACCAATTGAGAAATCTGCTTGCAGCAGCAGATGAAAACCTACGTGGGGAATTTGATGTGCAGCAAATGGAATGCTTACTGGTTGTTGGTCTTTGGTGTGCTAATCCAGATTCAGCATCTAGACCTGCAACAAGGCAAGTGATTAACGTCCTTAACTCTGAAGCTTCTTTACCAATTCTCCCACTGCAAGGGTGTTAA 1989 0.4218 MHIIYHTTYNVCETSKKIKLNSHLPMAGYGLLFLFILIINIAITNAHTQSQAFEHPNFSSTYIKQLKLEGSAYTSGSAIQLTATAMNPKNWFGTVGRVTHPEQINLRDNNSNEPRDFITNFSFVVSSNKSVYADGLAFFLASPNLPSTETLQLRGGSLGVGLTDGYQELSMTGYRFLAVEFDTFTNPWDPIGPHVGININNMNSKILEKWWMDITHRKVCNCSIVYDSRNKILNVSYTGYKFRAGKVRKITQHLSYPIDIRQQLPDSVIVGISAATGKFFEEHTLLSWSFSATPSSKDDPEKARKSVIIKLLEGIGIGAGMFLILLGLVRISLGMMTKGKEIGHTSEATSDPKMDDEFQMSAGPKKISYHELATATNNFDEMNKLGQGGFGGVYKGYFKDSNTYAAIKRISANSKQGVKQYKAEVTIISQLRHKNLVKLTGWCHKKNDFLLIYEYMENGSLDSHLFRGESILSWQVRYNIALGLASALLYLQEEWEKCVLHRDIKSSNIILDSNFNPKLGDFGLARLVDHDKGSETTEVAGTMGYLAPEYMNTGHARKESDIFSFGVVVLEIATGRKAIHHKHMEGEVSVVEWVWELYQLRNLLAAADENLRGEFDVQQMECLLVVGLWCANPDSASRPATRQVINVLNSEASLPILPLQGC 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02459 662 CDD STKc_IRAK 385 649 - -
Phco4g02459 662 ProSitePatterns Legume lectins beta-chain signature. 177 183 IPR019825 -
Phco4g02459 662 SUPERFAMILY Protein kinase-like (PK-like) 356 648 IPR011009 -
Phco4g02459 662 ProSiteProfiles Protein kinase domain profile. 379 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02459 662 Gene3D Phosphorylase Kinase; domain 1 364 455 - -
Phco4g02459 662 Gene3D - 49 312 - -
Phco4g02459 662 ProSitePatterns Protein kinases ATP-binding region signature. 385 408 IPR017441 GO:0005524
Phco4g02459 662 SMART serkin_6 379 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02459 662 FunFam L-type lectin-domain containing receptor kinase IX.1 364 455 - -
Phco4g02459 662 Pfam Legume lectin domain 51 300 IPR001220 GO:0030246
Phco4g02459 662 SUPERFAMILY Concanavalin A-like lectins/glucanases 53 294 IPR013320 -
Phco4g02459 662 PANTHER - 81 651 - -
Phco4g02459 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Phco4g02459 662 FunFam Lectin-domain containing receptor kinase A4.3 456 661 - -
Phco4g02459 662 CDD lectin_legume_LecRK_Arcelin_ConA 53 293 IPR001220 GO:0030246
Phco4g02459 662 Gene3D Transferase(Phosphotransferase) domain 1 456 658 - -
Phco4g02459 662 Pfam Protein kinase domain 380 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02459 Phco-Chr4 45728906 45730894 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco4g02459 Pkinase 1.4e-48 CL0016