Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02458 ATGGTAGATTGTGTTTGGCGTTTTGGTCTTAATGCAATCACCCTGGGGTTTTGTTATGCAATGTTCCTCTTGATAATCCCTCTTGCAAAGGCTCATTCACAACCCTTTTCTTTTGATTACAACTTCAGAAATGCTGCTGAGGTAGAACAGCTAAACCTGGAAGGAAATGTTTCTGTTTCAAATTCTGGCATCAACCTCGCAGTGGACTCAAACGATGGTAGAAGTGGGAGTGTTGGGCGAGTCACAAGTCCCCAGCTTCTTCACCTTTGGAACAAGACCTCGAATGAAATAGAAAGTTTCGCTACCCACTTTTCCTTTATGATCATCTCAAACAAGACTTCTCGTGGAGACGGTATGACTTTCTTCCTAGCAAACAATCTCCCAAATGTGAATGCTACGAATGGAATAAAGCGGGGAGGCCTTGGCATTGGTGTTGTTCGTGACAACCTACCTCTCTCAGCCGGAATTAATCATTATCACTTTGTGGCAGTGGAGTTTGACACTTTCTCAAACTATTGGGACCCAGTGGACACACATGTGGGTGTGAATGTAAACTCTGTGCTATCTGAGATAGTTGAGAATTGGAGTACAGATACTACTTCAAAAGGCCCTTATAACTGTAGCATTGAGTACAACTCCCATGATTATTTTCTAAACGTTTCTTTCACTGGATTCATGGACAATGGAAAGCGAGTAACGCAGAACCTTCTTCACCCCATTGATTTGAGAGAATACTTAGAAGAGTGGGTTATTGTAGGTATATCAGCTGCAACAGGAGATGGATTTGATCAACATACCTTGCTGGATTGGTCATTTAGTAAGAACAAAAGTAATGATCAGAAAGGCAAGTTAAAGAAGACAATGTGGTTGGGGGGAATAGGAGTTGGTTTAGGCGGGGCACTGAGTTTCTTTTTGTTGCTCTTCGTAGTACTGAGGAAGAGGGGTGAGAGAGAAAAGGAAGAAGCCACTTCAGAAACCTCTTTTGATATGAAGATGGATAATGAGTTCCAAAAGGGCACTGGACCTAAGAAGATCAGATACGAGGTATTGGTATCTGCGACAAACAACTTTAAAGAGAGACACAGGGTGAGGCAAGGTGGTTTTGATTGTGTTTATAAAGGTTATTTCAAAGACCTAAACTCCTATGCTGCAATAAAGAGGATATCAACGGGTTCATCGCATGGTCTGAAGGAATATGCTGCGGAAGTAAGGATCATTACCCAATTGAGGCACAGAAATTTACTGAAACTCATCGGTTGGAGCCACAAGAAGAATGATCTCTTTCTGATATACGAGAACATGCCAAATGGCAGCTTATATTCTCATCTTTTTAGTGGAGAGAGTATCTTGTCGTGGCATGTGAGGTACAACATAGCTCTAGGCTTGGCCTCAGCATTGTTTTACCTACAAGAAGAGTGGGAAAAATGTGTGCTTCTTGGGGACATCAAATCAAGCAACATAATGTTGGACTCCAATTTCAATGCTAAGCTTAGGGATTTTGGCCTGGCAAGGCTGGTGGATCGTAAGAAAGGGTCACAAACCACAGTTATGGCTGGAACTACGGGTTACCTTGCTCCTGAATATGTTAGCACAGGAAAGGCTAGAAAGGAATCTGACATGTTCAGTTTTGGGGTTGTTTTGTTGGAGGTAGCCAGTGGAAGAAAAGCCATTGAGCAAGAAGAGAAAGAGTGTCAAGTATCAGTAGTTGAGTGGGTGTGGGAGCACTATAGAGTTAGAAATCTGCTTGCAGCCGCAGATCCAAACCTGAATGGAGAATTTGATGTGCAGCAAATGGAATGCTTGCTTGTTGTTGGTCTTTGGTCTGCTGATTCAGATAGCAAGAGAAGGCCCTCTATTAAGCAAGTGAGTAAGGTGCTTAACTTTGAAGCTCCTTTTCCTATTCTCCATCACCACCTATTTCCCTCCAACAACAACAGATGA 1941 0.4256 MVDCVWRFGLNAITLGFCYAMFLLIIPLAKAHSQPFSFDYNFRNAAEVEQLNLEGNVSVSNSGINLAVDSNDGRSGSVGRVTSPQLLHLWNKTSNEIESFATHFSFMIISNKTSRGDGMTFFLANNLPNVNATNGIKRGGLGIGVVRDNLPLSAGINHYHFVAVEFDTFSNYWDPVDTHVGVNVNSVLSEIVENWSTDTTSKGPYNCSIEYNSHDYFLNVSFTGFMDNGKRVTQNLLHPIDLREYLEEWVIVGISAATGDGFDQHTLLDWSFSKNKSNDQKGKLKKTMWLGGIGVGLGGALSFFLLLFVVLRKRGEREKEEATSETSFDMKMDNEFQKGTGPKKIRYEVLVSATNNFKERHRVRQGGFDCVYKGYFKDLNSYAAIKRISTGSSHGLKEYAAEVRIITQLRHRNLLKLIGWSHKKNDLFLIYENMPNGSLYSHLFSGESILSWHVRYNIALGLASALFYLQEEWEKCVLLGDIKSSNIMLDSNFNAKLRDFGLARLVDRKKGSQTTVMAGTTGYLAPEYVSTGKARKESDMFSFGVVLLEVASGRKAIEQEEKECQVSVVEWVWEHYRVRNLLAAADPNLNGEFDVQQMECLLVVGLWSADSDSKRRPSIKQVSKVLNFEAPFPILHHHLFPSNNNR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02458 646 Pfam Protein kinase domain 361 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02458 646 Gene3D Transferase(Phosphotransferase) domain 1 434 636 - -
Phco4g02458 646 SUPERFAMILY Protein kinase-like (PK-like) 339 627 IPR011009 -
Phco4g02458 646 CDD lectin_legume_LecRK_Arcelin_ConA 36 273 IPR001220 GO:0030246
Phco4g02458 646 Gene3D - 34 279 - -
Phco4g02458 646 SMART serkin_6 357 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02458 646 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 275 IPR013320 -
Phco4g02458 646 Pfam Legume lectin domain 36 283 IPR001220 GO:0030246
Phco4g02458 646 Gene3D Phosphorylase Kinase; domain 1 342 433 - -
Phco4g02458 646 ProSitePatterns Legume lectins beta-chain signature. 162 168 IPR019825 -
Phco4g02458 646 ProSiteProfiles Protein kinase domain profile. 357 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02458 646 PANTHER - 58 629 - -
Phco4g02458 646 FunFam Lectin-domain containing receptor kinase A4.3 434 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02458 Phco-Chr4 45724388 45726328 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco4g02458 Pkinase 2e-37 CL0016