Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02456 ATGGAGGCCAGCATCAATTCTCCAGCCATGGCACCATCTCAGTACTGCAAGAAAAGTTATGTACGTGTTTCTTTTCATGTCACATTAACACTCTTGCTTCTTCTAATACCTCATGCAGCTTCATTAGAATTCAATTATCAGCAACTTGGTGACGCTGGAAACGTCCTCAATATGTCGGGAGATGTTGAACCTCAAGAAGGATTCCTCAATCTCACCAAATATAAGGCAGATAGTGTTGGTAGAGTCATGTATTACAAATTATTGCCTCTTTGGGACAAGAGCTCGGGAAAGGTTGCAGACTTCACTACCCATTTCTCCTTTACCATCAACGCCCCAAATAAAACCAATCCTGGAGATGGAATCACCTTCTTTCTGGCACATCCAAACTTTCCAGAGTCCCAGATAGATGGAAGTGGTATTGGTCTTGCCAGCCGTGAGCAACTGAGGACTCAAAATTACGCAAAGGACTTTCCTTTTGTAGCAGTGGAATTTGACACCTTGTCTAATGAGTGGGATCCGAAACATGATCATGTGGGTATCAATGTTAATTTTCTTAACAGTACTAGCACTGCAGAGTGGTTCTCTAGCATGGATGAAAGAGGGTATGATGCTGATATTACTTTCAATTCTGCTTCAAACGAATTAAGTGTCACCTTCACTGGATATAAGGATAATGTCAAAATTAAACAGGGATTATCCTCATTGGTCAATTTGAGTGATATCTTACCTGAATGGGTTGAATTTGGCTTCTCTTCGGCAACAGGACATACTTATGAGGAACACGCTCTTAGTTCTTGGTCCTTCGAATCTACTTTGGAGATGGAACCAAACAAGGGTGGAAGCAAAAGAAGGCTGGGGATAGGGCTGAGCGTTGGACTTGGTGTAGGTGTTTTAATTGTTATTTTGGGGGTGACTTTTCTTGTGAGATGGATGCTGAGGACTAGAGGTATGGAAGAGGTCTCACTTTTTGACCATGCTATGGACAATGATTTCGAAAAAATCTCTCTACCCAAGAAGTTTTCCTTTCAAGAACTGGCCAGAGCAACTAATAACTTTGCAAGAGAAAACAAAATAGGACAGGGAGGTTTTGGGGCCGTCTACAGGGGATTTATAAGAGGGTTGAACACCCATGTTGCCATTAAGAAGGTATCTCGTGGATCTAGACAAGGGGTGAAAGAGTATATGTCTGAAGTAAAGATCATTAGTCAACTGAGGCATAGAAATTTGGTTCAACTTTTTGGGTGGTGCCATCAGCATGATGATCTGCTGCTGATTTATGAGTTCATGGAAAGTGGAAGCTTGGATTATTATCTGTTCAAGGGAAAAGGCCTGCTGACATGGAAAGTGAGATATAATATTGCGAGAGGCTTGGCATCAGCATTGTTATACCTGCATGAAGAGTGGGAAGAATGTGTGCTTCATAGAGACATAAAATCCAGCAATGTTATGTTGGATTCAAATTTTAATGCAAAGCTTGGAGATTTTGGGTTAGCCAGACTAATGGATCATGGGATAGAATCACAAACAACTGGTTTAGCAGGAACAATTGGGTATTTGCCTCCTGAAGCTACAACAAGAGGCAAGGCTAGCAGGGAATCTGATGTGTACAGCTTTGGAGTAGTTGCTTTGGAGATAGCCTGTGGCAGAAAGGCAATTGAACCTAATATGAATGAAAATATCTATTTGGTGGATTGGGTTTGGGAACTCCATGGCATTGGTGAAGTCCTTAAAGCCTCTGATCCAAGCTTATATGGACACTTTGATGAGAAGGAAATGGAGACGTTAATGATAGTTGGACTTTGGTGCACTCACACTGATTACCTTTTGAGGCCTACGATTAGACAAGCTGTTCAGATGCTTAATTTTGAAGCTCCAGTGCCAATTCTCACACCAAGAAACTATAATGCATCTTTGAGTTCTATGGCATCTAGGACTCCAGCTTTTGCAAATAACCCACATTCATCTTCAACTTCAAGCAGTAGTCTATTAACGGGGTCCTCACAATCCACCCCAAATCTTGAAATCATTACTCCAGCAGCTGCACCTTTGCATACCTACTAA 2061 0.4163 MEASINSPAMAPSQYCKKSYVRVSFHVTLTLLLLLIPHAASLEFNYQQLGDAGNVLNMSGDVEPQEGFLNLTKYKADSVGRVMYYKLLPLWDKSSGKVADFTTHFSFTINAPNKTNPGDGITFFLAHPNFPESQIDGSGIGLASREQLRTQNYAKDFPFVAVEFDTLSNEWDPKHDHVGINVNFLNSTSTAEWFSSMDERGYDADITFNSASNELSVTFTGYKDNVKIKQGLSSLVNLSDILPEWVEFGFSSATGHTYEEHALSSWSFESTLEMEPNKGGSKRRLGIGLSVGLGVGVLIVILGVTFLVRWMLRTRGMEEVSLFDHAMDNDFEKISLPKKFSFQELARATNNFARENKIGQGGFGAVYRGFIRGLNTHVAIKKVSRGSRQGVKEYMSEVKIISQLRHRNLVQLFGWCHQHDDLLLIYEFMESGSLDYYLFKGKGLLTWKVRYNIARGLASALLYLHEEWEECVLHRDIKSSNVMLDSNFNAKLGDFGLARLMDHGIESQTTGLAGTIGYLPPEATTRGKASRESDVYSFGVVALEIACGRKAIEPNMNENIYLVDWVWELHGIGEVLKASDPSLYGHFDEKEMETLMIVGLWCTHTDYLLRPTIRQAVQMLNFEAPVPILTPRNYNASLSSMASRTPAFANNPHSSSTSSSSLLTGSSQSTPNLEIITPAAAPLHTY 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02456 686 Pfam Protein kinase domain 353 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02456 686 CDD lectin_legume_LecRK_Arcelin_ConA 42 272 IPR001220 GO:0030246
Phco4g02456 686 ProSiteProfiles Protein kinase domain profile. 352 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02456 686 CDD STKc_IRAK 358 621 - -
Phco4g02456 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Phco4g02456 686 FunFam Lectin-domain containing receptor kinase A4.3 429 639 - -
Phco4g02456 686 SMART serkin_6 352 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02456 686 MobiDBLite consensus disorder prediction 645 670 - -
Phco4g02456 686 SUPERFAMILY Protein kinase-like (PK-like) 336 646 IPR011009 -
Phco4g02456 686 Gene3D Phosphorylase Kinase; domain 1 337 428 - -
Phco4g02456 686 ProSitePatterns Protein kinases ATP-binding region signature. 358 382 IPR017441 GO:0005524
Phco4g02456 686 Gene3D - 39 287 - -
Phco4g02456 686 ProSitePatterns Legume lectins alpha-chain signature. 242 251 IPR000985 -
Phco4g02456 686 Pfam Legume lectin domain 41 278 IPR001220 GO:0030246
Phco4g02456 686 PANTHER - 63 625 - -
Phco4g02456 686 Gene3D Transferase(Phosphotransferase) domain 1 429 634 - -
Phco4g02456 686 SUPERFAMILY Concanavalin A-like lectins/glucanases 40 274 IPR013320 -
Phco4g02456 686 FunFam L-type lectin-domain containing receptor kinase IX.1 337 428 - -
Phco4g02456 686 ProSitePatterns Legume lectins beta-chain signature. 160 166 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02456 Phco-Chr4 45709947 45712007 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco4g02456 Pkinase 1.3e-47 CL0016