Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02362 ATGGCAGATAACAATGTCAACCTCCCACCCGGCTTTCACTTTTATCCCACAGATGAAGAGCTTGTCGTCCATTTCCTTCAAAGAAAGGCAAATCTTCTACCTTGCCATCCAGATGTCATCCCTGATCTTGAACTCTACCCATATGATCCTTGGGAACTTCATGGTAGAGCTTTGGCAGAGGGAAAGCAATGGTACTACTACAGCAGGAGGACACAAAATAGGGTCACTGGCAATGGTTATTGGATGCCAATGGGAATGGAAGAGCCAGTGATTACAAGCTCAAGCAACAAGAGAGTTGGCATGAAGAAATATTACGTTTTCCATGTGGGAGAAGCCCCTGATGGTAACACCACCAATTGGATAATGCAAGAGTATCGTCTATTAGATTCTGCTTCCTCTAGCAGATCATCCAGAAGAAGACCACAACCAAAACCGGACCATAGTAAATGGGTGATATGTCGAGTTTATGAGCGGGATAACGATGATGATGATGGTGATGGACCAGAGCTCTCTTGTTTGGATGAAGTTTTCTTGTCATTGGATGATCTTGAGGAAATAATTAAAGCCTATAGCAGTTTAGCTTCCATTGTAATCAGTGAAGTCGCTATAGCTACATTTCCACATAGCAGCCTTTCAAGTGGGGCACTAGATGAAACTCATGGCCAAACCAAACAATATGCAGTGTGA 687 0.4338 MADNNVNLPPGFHFYPTDEELVVHFLQRKANLLPCHPDVIPDLELYPYDPWELHGRALAEGKQWYYYSRRTQNRVTGNGYWMPMGMEEPVITSSSNKRVGMKKYYVFHVGEAPDGNTTNWIMQEYRLLDSASSSRSSRRRPQPKPDHSKWVICRVYERDNDDDDGDGPELSCLDEVFLSLDDLEEIIKAYSSLASIVISEVAIATFPHSSLSSGALDETHGQTKQYAV 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02362 228 FunFam NAC domain-containing protein 104 17 161 - -
Phco4g02362 228 Pfam No apical meristem (NAM) protein 9 127 IPR003441 GO:0003677|GO:0006355
Phco4g02362 228 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Phco4g02362 228 PANTHER NAC TRANSCRIPTION FACTOR 56 8 164 - -
Phco4g02362 228 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Phco4g02362 228 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02362 Phco-Chr4 44732928 44734145 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco4g02362 NAM 3e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02362 4 44732928 44734145 Phco4g02362 4 44732928 44734145 ECH
Phco4g02362 4 44732928 44734145 Phco11g00154 11 994647 995784 PCT