Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02333 ATGGCGTCGTCGAAGGTTGTCTCGACGAATCCGGATCTGCCACGCGATTCTTCTATATCTCCCCTTACCTCTCTTCTTCTCTCCGATCTGCACCACCCTACCTCCATGGACGACCTCCTCAAGTCCATCACCCCTGTCGCCGCCAAGACCGTCGATGACGTCTGGAAGGAGATCGTTGCCGGCGCCCACCCCCACAACCCCGCTGCCAACGCCTCCGGAGACGGTAATGGCGCCAACGTTAACGCCACCGCCCCTGAGAGCTACGAGGCCATTACCCTCGAGGATTTCCTCACCAAGGCCGGTGCCGTCAGAGAGGAGGACGTCAGAGGGGTTCTGCCCCCTTCTTCTTCTTCCCCTCTCCCCTTCCCTCTCCCTCTCCCTGCTGAAGGCTCCTCTTCCTCCGTCGAGCCATTTGGAAACGGCGTTGCGCCCTCCAATTCGGTTCACAAAGGGAAGAGAAGGGTCGTCGAGGAACCGGTGGATAAGGCCACTCTGCAGAAGCAGAGGAGAATGATCAAGAATCGAGAGTCCGCCGCTAGGTCCCGGGAACGCAAGCAGGCTTACACATCCGAGCTCGAATATCTGGTTCACCAGTTGGAGCAAGAGAATGCTCGGTTACTTAATGAAGAGGCTGAGATGAGAAGGCAGAGGAAAAAGCAGCTCCTTGAGTTCATCATTCCAGTTGAAGAGATGTCTAAACCCAAAAAGAAACTTCGGAGAGTAAATTCAGCTCAATCATTATGA 744 0.5551 MASSKVVSTNPDLPRDSSISPLTSLLLSDLHHPTSMDDLLKSITPVAAKTVDDVWKEIVAGAHPHNPAANASGDGNGANVNATAPESYEAITLEDFLTKAGAVREEDVRGVLPPSSSSPLPFPLPLPAEGSSSSVEPFGNGVAPSNSVHKGKRRVVEEPVDKATLQKQRRMIKNRESAARSRERKQAYTSELEYLVHQLEQENARLLNEEAEMRRQRKKQLLEFIIPVEEMSKPKKKLRRVNSAQSL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02333 247 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 164 216 IPR004827 GO:0003700|GO:0006355
Phco4g02333 247 Pfam bZIP transcription factor 163 219 IPR004827 GO:0003700|GO:0006355
Phco4g02333 247 MobiDBLite consensus disorder prediction 1 20 - -
Phco4g02333 247 SMART brlzneu 162 226 IPR004827 GO:0003700|GO:0006355
Phco4g02333 247 Gene3D - 165 221 - -
Phco4g02333 247 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 32 242 IPR043452 GO:0003700|GO:0045893
Phco4g02333 247 MobiDBLite consensus disorder prediction 109 133 - -
Phco4g02333 247 Coils Coil 189 219 - -
Phco4g02333 247 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 165 223 - -
Phco4g02333 247 SUPERFAMILY Leucine zipper domain 166 217 IPR046347 GO:0003700|GO:0006355
Phco4g02333 247 CDD bZIP_plant_BZIP46 166 227 - -
Phco4g02333 247 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 169 184 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02333 Phco-Chr4 44417384 44419589 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco4g02333 bZIP_1 1.7e-12 CL0018