Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02321 ATGGACTGGAGGCGTCGGACCAAGAAGCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGCCTCGGTTGGAGCGCCTCAACGCCAAAAAGGGCTTCAATTACCAACCACCACCCTCTCCACCATCTCCGTCTTCCACCCATTTGGATCGCCAAACCAGCTTCCGTCTCTTCGGCATCGACGGCGAGTTCGACCGCATCTTCCGGACCCTGGGCCTCTCCGGCCCGGAAGACTTCTCCATCCCAGCCGCTGACTGGGAAGCCCGGAAGGCCCGCGTTGCTTCCTCCAACGCCGCCGGGCCCACCACTACCTCTCACGCGCTTATCCGCGCTTCTCCCGAGATCCACCCTGTTTCCGTCACTGCTACTGCTGCCGCTACCCTCCAAGGCGACGTCGTTTCCGTTCGCGATTCCGTTCTGGGTTCCTCCCCTTGGTCCTCCGGGGAGCATGACGCGGGTAGGGGTAGTGTCGGCCGGTTGAGAAACGGAGAAAGGAGCGTGCTTTTCACCGATTCAGGTTCGTTCACCACTTCCCACGATGATGACAGTGACATTGGCGGCGAGAGGGTTTGTTCGGTTTCTAATTCCGCCGCGCCGGATGAGCTGGCTGTGCCTTTTGTCTCCTCCTTTTCCTTTGAGTGGTTCAGACAGACTTTCTCCTCCTGGCAAAAAGGTGACCTCTTGGGAAATGGGTCTTTCGGAACCGTCTATGAAGGCTACACTGATGAGGGATTCTTTTTTGCGGTAAAGGAGGTGTCTTTGCTGGATGAAGGTACTCAGGGAAAACAGAGCATTTTCCAGCTTCAGCAGGAAATATCTCTTTTGAGTAAGTTTGAGCATAAAAACATAGTTCGATATTATGGCTCGGACAAGGACAAAACTAAACTATATATCTTCCTTGAGCTTATGTCAAAAGGGTCATTAGCAAGTCTCTACCAAAAGTATCTTTTAAACGATTCCCAAGTTTCTGCATACACAAGGCAGATTTTATGTGGCTTGAAGTATCTTCATGATCATAATGTGGTCCACAGGGACATCAAGTGTGCTAATATACTGGTTGATGTAAGTGGGGCAGTCAAGCTTGCAGATTTTGGGTTGGCAAAGGCAACAAAATTTAATGATGTGAGATCAAGCAAAGGCTCCCCTTACTGGATGGCCCCTGAGGTTGTTAACTTAAAGGACCAAGGTGGTTATGGGTTAGCCGCTGATATATGGAGCTTAGGGTGTACAGTTTTGGAGATGTTGACACGCCAACCTCCTTATTCGGATTTGGAAGGAATGCAAGCATTATTTCGGATTGGCAAGGGTGTACCTCCACGTATTCCGGATCATCTATCTAAGGATGCCCGAGATTTCATCCTTGATTGCTTACAAGTTAACCCAAATGAACGTCCAACGGCAGCTCGGCTATTGGATCATCCATTTCTAAGGAGAACATTACTGTCTCCCTTAAGTTTTGCTTCTCCACAAAGGAATATGTATCGGTCATAA 1506 0.5046 MDWRRRTKKQAQAQAQAQAQAQAQAQPRLERLNAKKGFNYQPPPSPPSPSSTHLDRQTSFRLFGIDGEFDRIFRTLGLSGPEDFSIPAADWEARKARVASSNAAGPTTTSHALIRASPEIHPVSVTATAAATLQGDVVSVRDSVLGSSPWSSGEHDAGRGSVGRLRNGERSVLFTDSGSFTTSHDDDSDIGGERVCSVSNSAAPDELAVPFVSSFSFEWFRQTFSSWQKGDLLGNGSFGTVYEGYTDEGFFFAVKEVSLLDEGTQGKQSIFQLQQEISLLSKFEHKNIVRYYGSDKDKTKLYIFLELMSKGSLASLYQKYLLNDSQVSAYTRQILCGLKYLHDHNVVHRDIKCANILVDVSGAVKLADFGLAKATKFNDVRSSKGSPYWMAPEVVNLKDQGGYGLAADIWSLGCTVLEMLTRQPPYSDLEGMQALFRIGKGVPPRIPDHLSKDARDFILDCLQVNPNERPTAARLLDHPFLRRTLLSPLSFASPQRNMYRS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02321 501 MobiDBLite consensus disorder prediction 10 27 - -
Phco4g02321 501 SMART serkin_6 227 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02321 501 FunFam Mitogen-activated protein kinase 1, putative, expressed 225 494 - -
Phco4g02321 501 SUPERFAMILY Protein kinase-like (PK-like) 224 493 IPR011009 -
Phco4g02321 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 346 358 IPR008271 GO:0004672|GO:0006468
Phco4g02321 501 Pfam Protein kinase domain 228 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02321 501 PRINTS Tyrosine kinase catalytic domain signature 305 318 IPR001245 GO:0004672|GO:0006468
Phco4g02321 501 PRINTS Tyrosine kinase catalytic domain signature 450 472 IPR001245 GO:0004672|GO:0006468
Phco4g02321 501 PRINTS Tyrosine kinase catalytic domain signature 340 358 IPR001245 GO:0004672|GO:0006468
Phco4g02321 501 PRINTS Tyrosine kinase catalytic domain signature 407 429 IPR001245 GO:0004672|GO:0006468
Phco4g02321 501 ProSitePatterns Protein kinases ATP-binding region signature. 233 255 IPR017441 GO:0005524
Phco4g02321 501 ProSiteProfiles Protein kinase domain profile. 227 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02321 501 Gene3D Transferase(Phosphotransferase) domain 1 225 498 - -
Phco4g02321 501 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 59 485 - -
Phco4g02321 501 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02321 Phco-Chr4 44259170 44263840 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phco4g02321 Pkinase 4e-68 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00112 11 725692 730131 Phco4g02321 4 44259170 44263840 PCT