Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02315 ATGTGCAACATCCTTGGTCCAATTATGGACAACTATCAAGGTGATTTAAGCGACATAATTCGTGCTAGTGGTGCATCATATGGCAGTTGCAGCATGGGAACTTCATCATCTAAAGCTTGTGCTCCGTTTTCTCTCGATCACTTCTCTTCTGTTTTGGAAGGGTTTAATAGCAACTTTGGTGATCCGTTCTCAAACACGAGAGATCCCTTTCTACATGAGCTTGAATTGCCCGCAGGCTCTGCTGCCTACTTTAACAGCACAACAAGTTCTGCAGAAATTAGCAGTTCTGGGGCATTGGAAGAAGCAACTTGTTTCCGTGGTGGGGTTGCTGGTAACAGTAATAGTTGTGTTTTGAAACAAACGATTCTTGAGGATGATGACATGAGAAGGCCTTGTAATAGCATATTGGCAAACATGATTCAGATCTCTCCCCCCAATGATAAGTTACCCATCTTGCCAGGGGTGGATGCTTTGTCAAGGACACTCAAGCCTTCTGGTGTGGTTTTAGGTGATAACATGACTAATTTGAAGAAGACCTTGGAAGATGATTGCTTGGTGGGCAACAGCAACAAAAAAGAAATGCAGATCTCATCCCCACGGAATCCAGGTCTTAAGAGAAGGAAGAGTCCAGCAAAGAAGTCTATTTGTGTTCCTGCACCAGCTGCACCAAACAGCAGACAAAGTGGCGAGGTAGTCCCTTCTGATCTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCTCCATATCCAAGGGGATACTATAGATGCAGCAGCTCAAAGGGTTGCCCTGCCAGAAAGCAAGTTGAGAGGAGCAGAACAGATCCAAACCTGTTGGTCATTACTTACACGTCAGAGCACAACCATCCATGGCCAACTCACAGAAATGCTCTCGCTGGTTCTTCTCGATCCCAACCTTCATCCAAGGGCAACAACATTGGTGCTTCAAAGAATTCAGAAACTAGTCACCAAAACGAGGAAGAGCAGCATGAGGAGAGCAACAGTGACAGCAATAATGTAAATAACAGTGGATGTGTTCAGGAAGAGAAGCAGCTTGAGACGGATGATGGAGAATTCAGTGATATTGGACTACCTTACAAGCCAATATCTAATATGTACGAACAACTTGATCAGGGTTTGTTTGCAGAATTGGGAAAAATAGAAAAAGCTCACTCACTAAACCTAATGTCTCCACCACAAGGTTTTGATGATCAGCAAAGGGAATCCAACGCTTTAGATTCATTCCATATCTTTGACTGGAGCGGTGATAACAGCACCAAGTTCCACCTCATTTGA 1302 0.4401 MCNILGPIMDNYQGDLSDIIRASGASYGSCSMGTSSSKACAPFSLDHFSSVLEGFNSNFGDPFSNTRDPFLHELELPAGSAAYFNSTTSSAEISSSGALEEATCFRGGVAGNSNSCVLKQTILEDDDMRRPCNSILANMIQISPPNDKLPILPGVDALSRTLKPSGVVLGDNMTNLKKTLEDDCLVGNSNKKEMQISSPRNPGLKRRKSPAKKSICVPAPAAPNSRQSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRTDPNLLVITYTSEHNHPWPTHRNALAGSSRSQPSSKGNNIGASKNSETSHQNEEEQHEESNSDSNNVNNSGCVQEEKQLETDDGEFSDIGLPYKPISNMYEQLDQGLFAELGKIEKAHSLNLMSPPQGFDDQQRESNALDSFHIFDWSGDNSTKFHLI 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02315 433 MobiDBLite consensus disorder prediction 192 212 - -
Phco4g02315 433 FunFam probable WRKY transcription factor 14 207 287 - -
Phco4g02315 433 SMART WRKY_cls 233 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g02315 433 MobiDBLite consensus disorder prediction 277 322 - -
Phco4g02315 433 Pfam WRKY DNA -binding domain 235 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g02315 433 SUPERFAMILY WRKY DNA-binding domain 231 294 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco4g02315 433 ProSiteProfiles WRKY domain profile. 228 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g02315 433 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 15 395 IPR044810 GO:0003700
Phco4g02315 433 MobiDBLite consensus disorder prediction 258 345 - -
Phco4g02315 433 Gene3D WRKY domain 222 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02315 Phco-Chr4 44169365 44172574 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco4g02315 WRKY 2.9e-25 CL0274