Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02311 ATGGCTACCATTTTTTCAACTTGCTACCTGTTTCTTCCCATGATTTTATCGTTATTCCCCACAACACTGTGTGCAACAGTGGTTGAAGACCTCAAAAACTTACATCAACCCCCAGGCTTTAACTCTACAATTCTGTCCAACTGTCTCAAGAACCCATCTCTTAGGTACTGCAGTTCGTCTCCAATCATGGACTTTGATGAAATATTCAAGTTTACTATTGTTGCAAGCCATCTCTGCAATGAATCAAAGAACCCCAATTGTGTAGAGTCATTCCCCAAAGTTGATCTTAGAAACCGTCCAAATATTGCACCACTTTATTTGTCCTTTGATTTCTTTTGGAAGTATTGCCCCTTCAGCATTATGTCCATTGATTTGTCCAACAATTCTATGAAGGGTGGTTTTCCAACCGATGTTTTCTTTTGCACCCAAATCCACTCTCTTGATCTAAGTATCAATGCATTTTCTGGTGACATTCCAATTCAAAGTTTCTCTTCCTTCACCAACCTCACTTTTCTCAACCTCTCCTATAATTATTTTTCAGAGAGTAAACTGTCTGATTCCCAATTCTTCAAAAGGTTTAATTCTTCTAGTTTTCTTCATTCCGGTGCTCTCTTGGATCAAAAAAGGTTTACTGTGAAGGCTGTTGTTCTGTTAGTTTTCTTTCCCATCCTTGTCATTTTTATGGTAATTTGCTTGGTATGGTTTTTTTTCCAAAGGCCTGATTTTCTCCCAAGTAAACTTCAAAGAGGTAGGAGATTTACACCAGCAATTCTAAAGGCAGCAACGGATGGTTTTTCAAATAAGTATTTGGTGGGGATGAGTGATGTTGTTCACATCTACAAAGGGATCTTGAGAGATGGTACTGAAGTGAAAATTGAGATGTACTGGGATGATATACCAAGGGATAGTTACCGTAGATTTGTTGAAGAATGCAAGGTACTGCCAAAGTTACACCACAAAAACCTTGTCAGAGTTTTGGGGTGGTGTAAGAGCAGAAAATTCAGGGCCATTATAACAGAATGGACGAGAGAAGAAAATGTTGAAATGTGGTTATCAGGGTCAGGTTCAACATGGAAGCATAGAGTGAAAGTGTTAATGGGGGTTGTAGAATGCATGCGTTATATGCAGAAGGAATGGCCTGAAATTGACTATGAACTCGACACAAGTAGTATTTTGTTGTCTGACAAAATGGAACCATTGATTTCAAGGTTCAAAGTTGGAGATCACAACAGCAATCAAAGAAAGATACATAGGTTTGGAATATTTCTGCTGGAGATGATACTAAATAAGAAGGTTGAAGGAGGTGATGCTGGATTTATTAGGAACATGAGAAACCTTAATCATGGAGATTTGCAGCAGATGATTGATGAGAGAATGGAAGTAACTGAAACAAATTTTGAGCAAGTTAAGCAGGCACTGTCTCTAGGATTAACGTGCATAGATGAATCAAACAGTGAGAAGCCAAGCTTGGGCATGATACTTAACACTGTAGCAAGAGCCTACAAAACTAGCCTTGTTTTGCCATCTGCAAACCATAGAACATTTAAGGGACACATGCCTGTTAAAACCAATTAA 1575 0.3854 MATIFSTCYLFLPMILSLFPTTLCATVVEDLKNLHQPPGFNSTILSNCLKNPSLRYCSSSPIMDFDEIFKFTIVASHLCNESKNPNCVESFPKVDLRNRPNIAPLYLSFDFFWKYCPFSIMSIDLSNNSMKGGFPTDVFFCTQIHSLDLSINAFSGDIPIQSFSSFTNLTFLNLSYNYFSESKLSDSQFFKRFNSSSFLHSGALLDQKRFTVKAVVLLVFFPILVIFMVICLVWFFFQRPDFLPSKLQRGRRFTPAILKAATDGFSNKYLVGMSDVVHIYKGILRDGTEVKIEMYWDDIPRDSYRRFVEECKVLPKLHHKNLVRVLGWCKSRKFRAIITEWTREENVEMWLSGSGSTWKHRVKVLMGVVECMRYMQKEWPEIDYELDTSSILLSDKMEPLISRFKVGDHNSNQRKIHRFGIFLLEMILNKKVEGGDAGFIRNMRNLNHGDLQQMIDERMEVTETNFEQVKQALSLGLTCIDESNSEKPSLGMILNTVARAYKTSLVLPSANHRTFKGHMPVKTN 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02311 524 Pfam Protein tyrosine and serine/threonine kinase 278 404 IPR001245 GO:0004672|GO:0006468
Phco4g02311 524 ProSiteProfiles Protein kinase domain profile. 265 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02311 524 SUPERFAMILY L domain-like 83 184 - -
Phco4g02311 524 Gene3D Phosphorylase Kinase; domain 1 241 341 - -
Phco4g02311 524 Gene3D Ribonuclease Inhibitor 45 209 IPR032675 -
Phco4g02311 524 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 105 192 - -
Phco4g02311 524 SUPERFAMILY Protein kinase-like (PK-like) 243 498 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02311 Phco-Chr4 44106909 44108593 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Phco4g02311 PK_Tyr_Ser-Thr 1.1e-09 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02311 4 44106909 44108593 Phco4g02311 4 44106909 44108593 ECH