Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02280 ATGTCTGTTGAACCTAAAGAACTTTACTACCAGGACCTTGTCCTAGACCACAACAATCAGCAGGGCACAGGAGCAGCAGCAGGAGGAGGATCTGACATGTACGAAAAGCACTTTTCCTCTTCCTTAATCCCTGCAGGTTCAACACCCTATGATTCACAACCCTTTGATTCCTCCTACATGAGCTTCACTGACTGTTTGCAAGGGGGCATGGACTACAATTCTCTTGCAACTTCCTTTGGCCTTTCTCCTTCCTCATCGGAGGTTTTCTCATCTGTTGAAGGAAACCACAAGCCTGCAGAAGGAGGAGATGGAGGTGCTGGCAGTGGTGGAAGTGAAACCCTTGCGACCCTTAACTCATCTATCTCTTCTTCATCTTCTGAGGCTGGGGCTGAAGAAGATTCAGGAAAGAGCAAAAAGGATAGGCAGGTGAAAGCAGAAGAAGGAGGAGGAGGAGAAAACTCTAAGAAAGGGCACAAGGATAAGAAGAAAGGAGAGAAGAAACAGAAGGAGCCAAGGTTTGCCTTCATGACCAAGAGTGAGGTTGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCTGTCAAGAATAGCCCTTACCCAAGGAGCTACTACAGGTGCACTACACAGAAGTGCACAGTGAAGAAACGCGTGGAGAGGTCATTTCAGGACCCAACCACTGTGATAACAACGTATGAAGGTCAGCACAACCATCCGGTCCCCACATCGCTGAGAGGGAATGCGGCCGCAGGAATGTTCACACCTTCTTTGCTCGCCACACCAACTCCACTTGCAGCCGGGTCAAACTTCCCTCAAGATCTCTTCCTTCACATGCATCACCACCACCCTCACCATCACTTTCACAACACCCTCTTCTCCACACAATCAACAAACGCTGTTACTACCACCACCACTACTGTTACAACTGCTGCTACTCCTCCCTCCATTTACTCTTCCTATAACATTAACAACTCTCTTCTTCACAACCAGTATCTTCCTTCTGAATATGGTCTCCTTCAAGACATAGTTCCTTCCATGTTCCACAACAAGACACACCCCCAGAATTAA 1077 0.4745 MSVEPKELYYQDLVLDHNNQQGTGAAAGGGSDMYEKHFSSSLIPAGSTPYDSQPFDSSYMSFTDCLQGGMDYNSLATSFGLSPSSSEVFSSVEGNHKPAEGGDGGAGSGGSETLATLNSSISSSSSEAGAEEDSGKSKKDRQVKAEEGGGGENSKKGHKDKKKGEKKQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPTTVITTYEGQHNHPVPTSLRGNAAAGMFTPSLLATPTPLAAGSNFPQDLFLHMHHHHPHHHFHNTLFSTQSTNAVTTTTTTVTTAATPPSIYSSYNINNSLLHNQYLPSEYGLLQDIVPSMFHNKTHPQN 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02280 358 MobiDBLite consensus disorder prediction 131 174 - -
Phco4g02280 358 Pfam WRKY DNA -binding domain 185 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g02280 358 SUPERFAMILY WRKY DNA-binding domain 176 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco4g02280 358 ProSiteProfiles WRKY domain profile. 179 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g02280 358 FunFam WRKY transcription factor 57 170 244 - -
Phco4g02280 358 MobiDBLite consensus disorder prediction 111 130 - -
Phco4g02280 358 Gene3D WRKY domain 168 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco4g02280 358 SMART WRKY_cls 184 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g02280 358 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 103 287 IPR044810 GO:0003700
Phco4g02280 358 MobiDBLite consensus disorder prediction 83 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02280 Phco-Chr4 43591970 43593543 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco4g02280 WRKY 1.6e-25 CL0274