Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02161 ATGAACTGGGTTCGTGGAGACTCACTCGGCCATGGAACCTTTGCCACCGTCAACATCGTCGTTCCTGCAAACGGCTCCACTTTTTTCCCTTCTCCACTCGCCGTCAAATCCTCTGTTTCCCACAACGCCGGTTTGCTAAAAAACGAAAAGGAGATACTCTATCGCCTTGGCTCTTCCCCTTACATCATCAACTGTTTCGGTCACGATCACACCGTCGAGAACGGCGAGGAGTTCTACAACGTCTTCCTCGAACAGGCCGCCGGAGGTTCCCTCGCCGATCAGGTCAAGAAACACGGCGGAAGCCTCCCGGAGCCTTTCGTGCGGCGATGCACAAGGTCCATCGTGGAAGGGCTCAGACATATTCACGAGCACGGTTTTGTTCACTGCGACGTGAAGCTTCAAAACGTTCTCGTTTTCGACAACGGCCAGGTGAAAATAGCAGACTTCGGGCTCGCCAAGGAGAAGGGGGAGAAACAGGGCAAGTGCGAGTGCAGGGGAACGCCGTTGTTTATGTCACCGGAATTGGTGAATGACAATGAGTATGAGCCGCCGGCGGATATTTGGGCCCTGGGATGCGCCGTCGTGGAGATGGTGACCGGAAAACCCGCGTGGGATGTTCGCGACGGATCGAGTATTTGGTCATTGTTGATTCGGATTGGCGTGGGAGAAGAATTGCCAAAGATTCCAGAAGATTTGTCGGAAGAGGGGAAGGACTTTTTGGGAAAGTGCTTTGTTAAGGATCCCACGAAGAGGTGGAGCGCTGAGATGCTTCTCAAACACCCTTTCATCAAAGTTGACTCATTTTCGTTTGATAAAGTTAATGAGCCGTTACCGCCGCCGTCACCAAGTACCCACTTTAATTTTCCTTACTGGGCTTCCACCTTAACGGCTTCACTCCCGTCTTCCCCGTATTCCGACGAGTGGTCTACGTGGTCGTGTTCGCCGGAGAGTCGTCTCCGGCGGCTTGTTACCGATAAGAGACCGGAGAATTGGTCAGAATCGGCTGGGTGGATGAGCGTTAGGTGA 1026 0.5312 MNWVRGDSLGHGTFATVNIVVPANGSTFFPSPLAVKSSVSHNAGLLKNEKEILYRLGSSPYIINCFGHDHTVENGEEFYNVFLEQAAGGSLADQVKKHGGSLPEPFVRRCTRSIVEGLRHIHEHGFVHCDVKLQNVLVFDNGQVKIADFGLAKEKGEKQGKCECRGTPLFMSPELVNDNEYEPPADIWALGCAVVEMVTGKPAWDVRDGSSIWSLLIRIGVGEELPKIPEDLSEEGKDFLGKCFVKDPTKRWSAEMLLKHPFIKVDSFSFDKVNEPLPPPSPSTHFNFPYWASTLTASLPSSPYSDEWSTWSCSPESRLRRLVTDKRPENWSESAGWMSVR 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02161 341 Gene3D Transferase(Phosphotransferase) domain 1 2 282 - -
Phco4g02161 341 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 300 - -
Phco4g02161 341 FunFam Mitogen-activated protein kinase kinase kinase 17 2 295 - -
Phco4g02161 341 SMART serkin_6 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02161 341 CDD STKc_MAPKKK 2 263 - -
Phco4g02161 341 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Phco4g02161 341 ProSiteProfiles Protein kinase domain profile. 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02161 341 Pfam Protein kinase domain 5 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02161 341 SUPERFAMILY Protein kinase-like (PK-like) 3 309 IPR011009 -
Phco4g02161 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02161 Phco-Chr4 42311626 42312651 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phco4g02161 Pkinase 3.2e-52 CL0016