Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02123 ATGGACAAGGACAAGGACAAGTCCCACACTCAGAATTTTTTTCACAGTTTTGTCAAACACTTCAAATTCGGTTCTAGTAAAGAGCGAAACGATGAAGCTGACATACAGAAAATGGCTGCACAAGAGCAGAAGATTTTTCCCTATGAAACCTTGGCCGCTGTCACCAAGAATTTTAGTGATATTCACAAGCTAGGCGAGGGAGGTTTTGGACCTGTCTACAAGGGGAAGTTGAATGATGGTAGAGAGATCGCTGTGAAGAAGTTATCACACACTTCAAATCAAGGAAAGAAAGAGTTCATGAACGAGGCCAAGTTATTGGCTCGTGTGCAGCATCGGAATGTGGTGAATTTGGTGGGCTATTGTGTCCATGGCAACGAAAAGCTACTTGTTTACGAGTATGTTGCTCATGAAAGCCTTGACAAGTTTCTTTTCAAATCAGAAAAGAGAGAGAAGCTTGATTGGAAACGTAGGTTGGGCATAATCACAGGAGTTGCAAAAGGGTTGCTTTATCTGCACGAAGACTCACACAATTGCATCATCCATCGTGACATCAAGGCCAGTAATATCTTGCTTGATGACAAATGGACGCCCAAGATTGCAGATTTTGGCATGGCCCGTCTCTTCCCCGAAGATCAATCCCAAGTCAACACACGTGTGGCTGGAACCAATGGATACATGGCTCCGGAATATGTTATGCATGGAAATCTATCGGTGAAGGCAGATGTATTTAGCTATGGAGTTTTGGTATTGGAGTTGATCACCGGCCAAAGAAACTCCTCTTTTAATTTGGATGTGGACGCGCAGAACATGCTTGATTGGGCATACAAGATGTACAAGAAAGGGAAGAGCTTAGAAATTGTGGATTCGACGATGGCAGGTACAATGGTAGGTGAAGAGGTAGCGATGTGCATTCAGATGGGTTTGTTATGCACTCAAGGAGATCCACAGCTACGTCCCACGATGAGGCGTGTGGTGGTGATGCTGTCGAGGAAGCCAGGGCAGATGCAAGAGCCAAGCAGACCAGGAGTGCCTGGTTCTAGATACAGAAGACCTCGAAGACACTCTGCATTGTCTTCCACATTGGGTATCTCTGGTGCCTCCGATTCACACACTTCTGATTCAAGTAATAATTATACCACTGTTACTACTAGTGCCACAGGGACCAGCTCCGCTACTGTTGAAGCAGACCCCAAAGGTAAACGTCCAATGCGGGAGGGTTAG 1221 0.4554 MDKDKDKSHTQNFFHSFVKHFKFGSSKERNDEADIQKMAAQEQKIFPYETLAAVTKNFSDIHKLGEGGFGPVYKGKLNDGREIAVKKLSHTSNQGKKEFMNEAKLLARVQHRNVVNLVGYCVHGNEKLLVYEYVAHESLDKFLFKSEKREKLDWKRRLGIITGVAKGLLYLHEDSHNCIIHRDIKASNILLDDKWTPKIADFGMARLFPEDQSQVNTRVAGTNGYMAPEYVMHGNLSVKADVFSYGVLVLELITGQRNSSFNLDVDAQNMLDWAYKMYKKGKSLEIVDSTMAGTMVGEEVAMCIQMGLLCTQGDPQLRPTMRRVVVMLSRKPGQMQEPSRPGVPGSRYRRPRRHSALSSTLGISGASDSHTSDSSNNYTTVTTSATGTSSATVEADPKGKRPMREG 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02123 406 FunFam Cysteine-rich receptor-like protein kinase 10 22 133 - -
Phco4g02123 406 MobiDBLite consensus disorder prediction 357 393 - -
Phco4g02123 406 FunFam Cysteine-rich receptor-like protein kinase 10 135 340 - -
Phco4g02123 406 ProSiteProfiles Protein kinase domain profile. 58 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02123 406 SUPERFAMILY Protein kinase-like (PK-like) 43 339 IPR011009 -
Phco4g02123 406 SMART serkin_6 58 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02123 406 MobiDBLite consensus disorder prediction 332 406 - -
Phco4g02123 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Phco4g02123 406 Gene3D Transferase(Phosphotransferase) domain 1 135 339 - -
Phco4g02123 406 Gene3D Phosphorylase Kinase; domain 1 19 133 - -
Phco4g02123 406 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 383 - -
Phco4g02123 406 Pfam Protein tyrosine and serine/threonine kinase 62 327 IPR001245 GO:0004672|GO:0006468
Phco4g02123 406 CDD STKc_IRAK 64 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02123 Phco-Chr4 41692282 41696314 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco4g02123 PK_Tyr_Ser-Thr 3.6e-52 CL0016