Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02119 ATGGCTAATTTGGTAATGCACGATGATGATAATGCTCCAATGACCTTATTCTATGCATCAATATTCTTGGTCTTGGTAGCCTCCATTAGTTCCCAAGAAGAGAACAAACACCAAGAGTGTAGCAAGCCATTCAGGTGCGGGTTATTGTCCATCTACTACCCTTTCTGGGGAGGGAGCAGACCCAGTTATTGTGCCAGCAACCACCAGTTCAAGCTCAAGTGTGAGGGTAATCAGAACTCCACCATTCAACTTGGCTCAGCAACTTTCCAAGTGCTTCACTTTGATCCAGTTCAATACACCGTGAAAATGGTTCGAACACGCCTTGTCTATGATAATTGCTCTTCCTCGGCCGTAACTAATAATTCCGTTGATTCAAGTCTCTTTAGTTACTTGAATGTTAGGAACATAACCATCTACTATGGTTGTCCCTACTCCCTGATTTCAAATAGCACACGCTCTTTTCCATGCAAGGAAGGTGGGCACATGGGTGCTTTCTATGGGGACCCTGCAACTAGGAAAGTCCAGGACTGTGAAGGACCTAGGATTGAAGTGCAAGTAGCACAGGAACTTGATCCTGATGGAGGAATTGAAGGGCTCAACAAAGCCTTGAGCAAAGGCTTTGAAGTACATCTTATTTCAGAGGCACAAGTTCAACACTGCTTAGAATGCATTTTATCTAATGGAACATGTGGGGCTAGTGATGATTCTCAGTTTTCATGTTTTTGCCCCAATGGAACTGAAGGTTTAGATTGCTCTCATCCTAATAGGGATAAATGGAACTGGCGAAGGAAGCTGGTTATAGGAGTTGGTGCTGCTGTTGTGAGTGCAATTGCAGTTGGGCTTGGGTTTTACATCTATTATGGTCGTCAAAAGAAGAAGAATTATCTCCATGCAGTAACATCATCTGTACTACGTAATTCTAAAGGAAACCCACTTAGTTCTTCTTTAGAAGACTCAGAGAAGGGAAGTAAATACTTTGGAGTCCACTTCTTCACCTATAGTGAACTTGAAGAGGCCACAAACTTCTTTGATCCTAACAGAGAGCTAGGAGACGGAGGATTTGGAAAAGTGTATTTTGGGAAACTTCAGGATGGAAGATTAGTTGCAGTGAAGAGAATGTACGAGAACAGTTTGAAAATTGAGCAATTCGTGAATGAAGTGGAGATCTTAACTGGGCTACACCACCAAAACCTTGTGTCTCTATACGGATGCACTCCTCGCCACAGTAGAGAACTAATGTTGGTATACGAATATGTTCCAAATGGAACCGTTGCTGATCATCTTCATGGTCAAAGAGCAAAGCCTGGCACACTCCCTTGGCACATCAGAATGAACATTGCCATTGAGACTGCTAGTGCATTGGTATATCTCCACGCTTCTGACATCATTCACAGAGACGTCAAAACCAACAACATTCTCCTTGACAACCACTTCAGTGTCAAAGTAGCAGATTTTGGCCTCTCACGTCTCTTCCCAACCCATGCCACACACGTTTCCACTGCCCCACAAGGGACTCCTGGTTATGTGGATCCTGAGTATCATGAGTACTACCACCTCACTGATAAGAGTGATGTTTATAGCTTTGGGGTGGTGCTCATTGAGCTCATATCATCCATGCATGCGGTTGATATCTCAAGGCGTAGGCATGAGATCAACTTGTCTAACATGGCCATCAAGAAGATCCAAAGCGGTGCGTTGCATGAGATTGTGGATCCCACTCTTGGGTTTGACTCTGATTTCAAGGTCAGGAAAATGATCAATAAAGTGGCTGAGTTGGCGTTTCAGTGCTTGCAGAGTTCCAAAGATGCCAGACCCTCCATGGCAGAAGTGTTGGATAGACTCGAGGATATAAGAAGTGATGGGAAGTGTAAGAGCAAGCATGAGGTGCTGGATATATCAGAAGATGATTCTGCTTTGCTCAAGAATGAACCACCTCCACCTTCACCTGATTCAAATTTGGTCACCATTTCTACACCACCAAATGTTGTATAG 1992 0.4383 MANLVMHDDDNAPMTLFYASIFLVLVASISSQEENKHQECSKPFRCGLLSIYYPFWGGSRPSYCASNHQFKLKCEGNQNSTIQLGSATFQVLHFDPVQYTVKMVRTRLVYDNCSSSAVTNNSVDSSLFSYLNVRNITIYYGCPYSLISNSTRSFPCKEGGHMGAFYGDPATRKVQDCEGPRIEVQVAQELDPDGGIEGLNKALSKGFEVHLISEAQVQHCLECILSNGTCGASDDSQFSCFCPNGTEGLDCSHPNRDKWNWRRKLVIGVGAAVVSAIAVGLGFYIYYGRQKKKNYLHAVTSSVLRNSKGNPLSSSLEDSEKGSKYFGVHFFTYSELEEATNFFDPNRELGDGGFGKVYFGKLQDGRLVAVKRMYENSLKIEQFVNEVEILTGLHHQNLVSLYGCTPRHSRELMLVYEYVPNGTVADHLHGQRAKPGTLPWHIRMNIAIETASALVYLHASDIIHRDVKTNNILLDNHFSVKVADFGLSRLFPTHATHVSTAPQGTPGYVDPEYHEYYHLTDKSDVYSFGVVLIELISSMHAVDISRRRHEINLSNMAIKKIQSGALHEIVDPTLGFDSDFKVRKMINKVAELAFQCLQSSKDARPSMAEVLDRLEDIRSDGKCKSKHEVLDISEDDSALLKNEPPPPSPDSNLVTISTPPNVV 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02119 663 Gene3D Transferase(Phosphotransferase) domain 1 419 630 - -
Phco4g02119 663 ProSitePatterns EGF-like domain signature 1. 240 251 IPR000742 -
Phco4g02119 663 Pfam Protein kinase domain 346 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02119 663 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 17 652 IPR044652 GO:0004672
Phco4g02119 663 FunFam Wall-associated receptor kinase-like 20 419 627 - -
Phco4g02119 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Phco4g02119 663 Pfam Wall-associated receptor kinase galacturonan-binding 40 104 IPR025287 GO:0030247
Phco4g02119 663 SMART serkin_6 343 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02119 663 ProSiteProfiles Protein kinase domain profile. 343 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02119 663 SUPERFAMILY Protein kinase-like (PK-like) 319 615 IPR011009 -
Phco4g02119 663 Pfam Wall-associated receptor kinase C-terminal 174 244 IPR032872 -
Phco4g02119 663 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Phco4g02119 663 MobiDBLite consensus disorder prediction 634 663 - -
Phco4g02119 663 Gene3D Phosphorylase Kinase; domain 1 315 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02119 Phco-Chr4 41630327 41633354 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phco4g02119 Pkinase 1.4e-46 CL0016