Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02118 ATGGATAAACTCAATAGAAACCATGCAGTTGCCTATGTAAAAGACCATGCAGTTGATATGAGACTAGATATATTATATGATTGGATTGGCATGGTTTGCTCTACTTTCGATTGCATATTATTGCCAACTTCATGTCCATACATCATGATGACTCCAAACTTGAACTTGGAACCCGAAAATCATTCAGAAGGAAGTAGCCAGGTGGCTTCCAATGTATCCTTGCATGAAGCATCTTATGATCTTACGAAGGGCAGCACCACCACTTCTTCATGTCTGACAAAGGATGAAACTGACCCAGGTTCTGTTACCCTTGACTTGACACTCAACTTCAATTCCAGTGATAGTGAGTTGAAAGGTTCTAGTGATGCAAGCAGTGAAGTGGGAGCTGAAGCTCCTGCTTCAGCATCAGCAACTCCCAGGGTTTTTTCTTGTAACTACTGCAGGAGGAAGTTCTATAGTTCGCAGGCCTTAGGGGGTCATCAAAATGCTCACAAAAGGGAGAGGACGATGGCTAAGCGTGCATTGAGAATGGGAATGTTCACTGAGAGATACACAAGTTTGGCATCTCTACCTCTTCATGGTTCACCTTTTAGGTCTCTTGGTCTTGAAGCTCATTCTGCAATGCACCAAAGACACGTCCCATCCTCACTGAGGACTCCTGATATGAGAGCCGCTGCAAGATTTGAGAGAAACCATTTTGGATCACTGGTTTTCATGGAAGATGATGATGTTGGCTTATTTTGGCCTGGAAGTTTCAGACAGGTAGACCAAGGAGCTGGTGTTAATGAAGGACATGTTCAAAGTTCAAATGCTAGTGTAGTTCCAATAGTGCCTCCTCCACCACAAGCTTCTGCATCTCCGGATCTCACATTGAAGCTTTAA 882 0.4365 MDKLNRNHAVAYVKDHAVDMRLDILYDWIGMVCSTFDCILLPTSCPYIMMTPNLNLEPENHSEGSSQVASNVSLHEASYDLTKGSTTTSSCLTKDETDPGSVTLDLTLNFNSSDSELKGSSDASSEVGAEAPASASATPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRALRMGMFTERYTSLASLPLHGSPFRSLGLEAHSAMHQRHVPSSLRTPDMRAAARFERNHFGSLVFMEDDDVGLFWPGSFRQVDQGAGVNEGHVQSSNASVVPIVPPPPQASASPDLTLKL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02118 293 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 63 215 IPR044246 GO:0009788
Phco4g02118 293 Gene3D Classic Zinc Finger 120 187 - -
Phco4g02118 293 MobiDBLite consensus disorder prediction 271 293 - -
Phco4g02118 293 ProSitePatterns Zinc finger C2H2 type domain signature. 144 164 IPR013087 -
Phco4g02118 293 SUPERFAMILY beta-beta-alpha zinc fingers 140 170 IPR036236 -
Phco4g02118 293 ProSiteProfiles Zinc finger C2H2 type domain profile. 142 169 IPR013087 -
Phco4g02118 293 FunFam Zinc finger protein 2 118 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02118 Phco-Chr4 41600634 41601591 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco4g02118 None None None