LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco4g02081	ATGGAGGAAAAGAAGGAGATATCCACGCCACCTTCGGAGGATGTTGGTGCTATTGACTTTATGGGAAGCTATGAACTGGGTCAGACCCTGTACGAGGGAAACTACTGTACCATTAAGCATGCAACTCAGGTTGTCAGCGGACAAAATGTTGCCGTCAAAATTATCGACAAAGAAAAGGTTCTCTGCGATAAAAAGAAGAATGTGTTGGACTTGGAACTGATAGAACGAAACGTATCAACAATGAAAAATATTAGACACCCGAATGTGGTGCATATCTATGAGGTTATCTCTACCGAAACACAGTTGTGTCTTATAATGGAACTTGCAACTGATGGGAAACTGTTTGATAAAATTAAAAACACCACGACCGGGAGACTGACAGAGCCCGAAGCAAGAAAATATTTTCAGCAGCTTATATATGCTGTGGCTTTCTGTCACAATAACGGTATTACTCATAGAAACTTAAAGTCAGAGAATCTGTTGGTGGGTGCTGATGGAATGCTTAAAGTATCATATCTTGGACTGAGTGCACTGTCCCAAGAAGTTGGAAATCATGGGATGTTTTGTCATGGCGGACCATGCGGTGCACCAAATTATAGGGCCCCAGAGGTGGAAAGCGTTAATGGCTATGATTATGCACGGGCAGACATATGGGCATGTGGTGTTATTCTGTTTGCTATGTTGACTGGTGATTTACCCTTCAACAGTGAGAACATTGGGATTGTATATCTAAAGGCCTGTGCAGCTGATTTCAGTTGTCCTTCATTTTTGTCTCCAACTTTAAAGAGACTAATTAGGAGAATCCTTGATCCCAATCCTGCTGCACGGATTACAATTGTTGAGATGTTGAAGGATGAATGGTTCGATAGTAATAATGAGGATGAACTTATTAGTTATGGCACTAATCATGTTGGGACGGGGCAAGATGCGGGGCCTTCAACTCATCAAATCAATAATGCATACGATGATCTGCGTACCTCTCCCTCGATCAAATTTGAAGCTGTCAAACGATTAGTAAATGTACTTGCTCGAAGGAAAAGAGTTTTCAGGACCAGTCTTTGTGGGAGTAAGATAATTTCAAGATTTGAAAAACCTATAGACCGCATGAATCTTCATACGAAGAGGATAGATATGGAGCTTGAAGGGGGATATGGACCCAAATTTGAGTTTCTATCAGTAAAAGTTAAGATTACTCCTTCGTTCTACCCTTATCTTTACAGGGTTACGATTCGAAAGAATGGAGGAGATGCTCGGGATTTTGACAAGTTCTACAAGGAACTAATTGATGAAGTGGAAGATATCATTTGGAATGAAGATAATATCCACCTACCACGTTTAGTGAATTAG	1347	0.4076	MEEKKEISTPPSEDVGAIDFMGSYELGQTLYEGNYCTIKHATQVVSGQNVAVKIIDKEKVLCDKKKNVLDLELIERNVSTMKNIRHPNVVHIYEVISTETQLCLIMELATDGKLFDKIKNTTTGRLTEPEARKYFQQLIYAVAFCHNNGITHRNLKSENLLVGADGMLKVSYLGLSALSQEVGNHGMFCHGGPCGAPNYRAPEVESVNGYDYARADIWACGVILFAMLTGDLPFNSENIGIVYLKACAADFSCPSFLSPTLKRLIRRILDPNPAARITIVEMLKDEWFDSNNEDELISYGTNHVGTGQDAGPSTHQINNAYDDLRTSPSIKFEAVKRLVNVLARRKRVFRTSLCGSKIISRFEKPIDRMNLHTKRIDMELEGGYGPKFEFLSVKVKITPSFYPYLYRVTIRKNGGDARDFDKFYKELIDEVEDIIWNEDNIHLPRLVN	448

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco4g02081	448	PANTHER	CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED	18	379	-	-
	Phco4g02081	448	ProSiteProfiles	Protein kinase domain profile.	24	288	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phco4g02081	448	Gene3D	Transferase(Phosphotransferase) domain 1	115	308	-	-
	Phco4g02081	448	Gene3D	Kinase associated domain 1, KA1	314	437	-	-
	Phco4g02081	448	Pfam	Protein kinase domain	24	288	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phco4g02081	448	FunFam	Maternal embryonic leucine zipper kinase	17	307	-	-
	Phco4g02081	448	SUPERFAMILY	Protein kinase-like (PK-like)	18	296	IPR011009	-
	Phco4g02081	448	Gene3D	Phosphorylase Kinase; domain 1	17	114	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco4g02081	Phco-Chr4	41154537	41157359	Proximal

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CAMKL-CHK1	Phco4g02081		Pkinase	6.5e-52	CL0016