Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02062 ATGGGTTTACCTTCTCTCCTTCTTGTTTTAACTCCTCTGCTGACATCATTGGCTATTTCCCAACCTGAAGAGTTTGTGAGCATTGATTGTGGGGGATCAAGTAATTACACTGATAACAGCACGGGGTTGGCATGGATCTCAGACTCTGGGATCATGGAGCTTGGCATTTCAGTGGAAGTGGAAAGTTCAAATGGAAGCATGGTGCAATATCAAAAGAGGAGAGACTTTCCCATAGACACCAAGAAGTACTGTTACACACTGAGGACAGAGGAGAGAAGAAGATACTTGGTGAGAGCAACATTTCAGTATGGAAGCTTGGAGAGTGGAGACACGTACCCTCAGTTTCAGCTCTACTTGGATGCAACCAAGTGGGCTACTGTGTCAATATATGATGCCTCAAGAATATATGTTAAGGAAATGATAATCAGGGCTCCCTCAAATTCTATTGATGTCTGTATGTGCTGTGCTACCACTGGTTCTCCTTTCATTTCCACTCTTGAGTTGCGACCCTTAAATCTTTCAATGTATGCCACGGATTTTGAAGACAATTTCTTCTTAGAAGTTGCTGCCAGAATAAATTTTGGTGCTCCAACTGAAGATGCTGTCAGGTACCCGGATGATCCATATGATAGAATTTGGGATTCCGATCTCATTAGAAGGCAAAATTATCTTGTTGGGGTAGCCCCAGGCACGGAAAGGATTAGCACTACAAAGAACATAGATGTAGAGACAAGAGAATACCCACCTGTTAAAGTAATGCAAACTGCAGTTGTTGGCAGAAAAGGAGTACTCAGCTACAGATTGAACCTGGAAGACTTCCCTGCCAATGCTCGAGCTTATGCATATTTTGCAGAGATTGAAGATTTGAACAAGAATGAGAGTCGAAAATTCAAATTAAAGCAACCTGACATAGCTGACTATAGCAATGCAGTGGTCAACATTGCTGAGAATGCCAATGGGAGCTACACTTTATATGAACCAAGTTACATGAATGTTACTCTAGAATTTGTTTTATCATTCTCCTTTGTTAAGACCCCAGATTCCACTCGAGGACCTCTTCTGAATGCTCTGGAAATAAGCAAATATGTGGAGATTGCTGCAAAGACAGACAAACAAGACTCAACCGTTGTAAATGCATTTCGGTTATTGTCTTCTGAAAGTTCCCAGACAAATGAAGGTGATCCTTGTGTTCCAACTCCTTGGGAATGGGTGAATTGTAGTACCACCACACCACCAAGAATTACAAAAATAATTCTGTCGAGAAGAAATGTGAAAGGTGAAATACCACCTGAGCTTAGCAACATGGAAGCATTGACAGAGTTGTGGTTAGATGGCAACCTGCTTACTGGACCATTACCTGACATGAGCAAACTTATCAATCTAAAGATTGTGCATTTAGAGAACAACAAGTTGTCTGGCCGACTATCGTCTTACCTTGGTAGTTTGCCAAGCTTACAAGCACTGTTCATACAGAACAACTCATTTAGTGGGGAAATACCGGCTGGATTAGTGTCTGAAAATATTGTCTTCAACTTTGAAGGTAATCCTGGACTATTCAGAGGGAACAAGAAGCATTTTAAGATGGTAGTGGGAATTTCAATTGGAGTACTAGTGATTCTGTTAATATTATTCTTGGTAAGTTTGGTGCTATTGCTCAATACGCGGAGAAAGGCATCTCAAAAGAAACGTGAGGAAAAAGGCATTTCTGGACGGACTAATAGTAAACCTTTAACTGGATACTCATTTCTTCGGGGTGGAAGTTTAATGGATGAAAATACTACTTGCCATATTACACTCTCAGAGTTGCAAGAAGCTACTGAAAATTTTTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTTTACTATGGGAAAATGAGAGATGGAAAAGAAATTGCAGTTAAGAGCATGAGTGAATCATCCTGCCACGGGAACCAGCAATTTGTTAACGAGGTGGCCCTTCTGTCCAGAATTCATCACAGAAATTTGGTTCCCTTGATAGGATATTGTGAAGAAGAATGTCAGCATATTCTGGTGTACGAGTATATGCACAATGGCACTTTACGGGATCACATTCATGATAGTTCCAAGAAGAAGAACTTAGACTGGTTAGCTCGTCTTCGTATTGCAGAAGATGCTGCTAAAGGTCTTGAATACTTACACACAGGATGCAATCCTAGCATCATTCACCGTGATATAAAGACAGCTAACATTCTCCTGGACATAAATATGAAAGCCAAAGTATCAGATTTTGGACTCTCTCGATTAGCCGAAGAAGATTTAACCCATGTATCAAGCATTGCACGAGGAACTGTAGGCTACTTGGATCCTGAGTACTATGCAAGTCAGCAATTGACAGAAAAGAGTGATGTATACAGTTTTGGAGTTGTTCTGCTGGAACTGATATCTGGAAAAAAACCTGTGTCAGCTGAAGATTACGGTGCTGAAATGAACATTGTTCAATGGGCTAGATCCTTAACTCGTAAAGGAGATGCAATGAGCATCATTGACCCTTCTCTGAATGGGAATGCTAAAACTGAGTCCATTTGGAGGGTGGTAGAAATTGCCATGCAATGTGTGGAACACCATGGTGCCTCAAGGCCAAAGATGCAAGAAATCATTTTGGCCATACAAGATGCTCTCAAGATAGAAAAAGGAACAGAAAATAAGCTAAAATCACCATCTTCATCATCATTTTCAGGTAGCAGCAGTTCAAAGCCACACTCTTCACGCAAAACTTTACTCACAAGCTTTCTTGAAATTGAGAGTCCTGACGTGTCAAATGGTTGCCTCCCATCAGCAAGATAA 2808 0.4085 MGLPSLLLVLTPLLTSLAISQPEEFVSIDCGGSSNYTDNSTGLAWISDSGIMELGISVEVESSNGSMVQYQKRRDFPIDTKKYCYTLRTEERRRYLVRATFQYGSLESGDTYPQFQLYLDATKWATVSIYDASRIYVKEMIIRAPSNSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEDNFFLEVAARINFGAPTEDAVRYPDDPYDRIWDSDLIRRQNYLVGVAPGTERISTTKNIDVETREYPPVKVMQTAVVGRKGVLSYRLNLEDFPANARAYAYFAEIEDLNKNESRKFKLKQPDIADYSNAVVNIAENANGSYTLYEPSYMNVTLEFVLSFSFVKTPDSTRGPLLNALEISKYVEIAAKTDKQDSTVVNAFRLLSSESSQTNEGDPCVPTPWEWVNCSTTTPPRITKIILSRRNVKGEIPPELSNMEALTELWLDGNLLTGPLPDMSKLINLKIVHLENNKLSGRLSSYLGSLPSLQALFIQNNSFSGEIPAGLVSENIVFNFEGNPGLFRGNKKHFKMVVGISIGVLVILLILFLVSLVLLLNTRRKASQKKREEKGISGRTNSKPLTGYSFLRGGSLMDENTTCHITLSELQEATENFSKKIGKGSFGSVYYGKMRDGKEIAVKSMSESSCHGNQQFVNEVALLSRIHHRNLVPLIGYCEEECQHILVYEYMHNGTLRDHIHDSSKKKNLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDIKTANILLDINMKAKVSDFGLSRLAEEDLTHVSSIARGTVGYLDPEYYASQQLTEKSDVYSFGVVLLELISGKKPVSAEDYGAEMNIVQWARSLTRKGDAMSIIDPSLNGNAKTESIWRVVEIAMQCVEHHGASRPKMQEIILAIQDALKIEKGTENKLKSPSSSSFSGSSSSKPHSSRKTLLTSFLEIESPDVSNGCLPSAR 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02062 935 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 408 499 - -
Phco4g02062 935 SUPERFAMILY Protein kinase-like (PK-like) 594 874 IPR011009 -
Phco4g02062 935 SUPERFAMILY L domain-like 397 503 - -
Phco4g02062 935 Gene3D Transferase(Phosphotransferase) domain 1 683 900 - -
Phco4g02062 935 Pfam Protein tyrosine and serine/threonine kinase 609 874 IPR001245 GO:0004672|GO:0006468
Phco4g02062 935 Gene3D Ribonuclease Inhibitor 368 520 IPR032675 -
Phco4g02062 935 MobiDBLite consensus disorder prediction 890 913 - -
Phco4g02062 935 CDD STKc_IRAK 613 874 - -
Phco4g02062 935 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 683 890 - -
Phco4g02062 935 PANTHER OS07G0107800 PROTEIN-RELATED 456 881 - -
Phco4g02062 935 ProSiteProfiles Protein kinase domain profile. 607 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02062 935 Pfam Malectin-like domain 28 361 IPR024788 -
Phco4g02062 935 FunFam serine/threonine-protein kinase PBS1-like 586 682 - -
Phco4g02062 935 SMART serkin_6 607 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02062 935 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
Phco4g02062 935 Gene3D Phosphorylase Kinase; domain 1 587 682 - -
Phco4g02062 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672|GO:0006468
Phco4g02062 935 MobiDBLite consensus disorder prediction 887 913 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02062 Phco-Chr4 40853473 40858398 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Phco4g02062 Malectin_like 4.7e-90 CL0202