Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02045 ATGGCGGCTGGGAGACATGGCGGTTACCGCGAAAACGAGTTCAGAGACCGCGAATCGAAACTCGAAGGTTCTAGACGCGGGTTCGCCAATTCGAAAGAGGATTACGACCGTGTTAGGAATGGTGGCGGTGATGTTGTGAGGGATGGGTCCAGGGACAGGGTTAGGGTGAGGCAGAGGGATATTAAGGAGAGGGAAGGTGTTAATGGTGGTTACCGATCATCTTCGAGTAGGAGTGACTCTGGCAGTAGTGGCCTTGGTCCTCGCCGGTGTGGTTTCTCTGTCAAGGCAATGGATAGAGAACCTGGTGAGCTTTCCAGTGAGAGTGGTTCTGATGATGCTATTGAATCAGAATTGGGGGCGAAAGACTCCGAGGTTGCCAAGTTGGAAGGAACCAGAACCCGATCTCCACCGGTGCCGGAGAGGAAAAGAAAATTCTCGCCCATTGTGTGGGATCAGGATGACAAAGATGTCAGTGAGTCATCCAAAGTTAGGGTTTCTGCCTCTACAGTGGTGACAGCAGCTCTTCCTCCTCCGCCTCCACTGCCAAAGGCGTTCCATCAGTCACAGTCACCAAATGCTCCAAATGGTGGAGTTGAAATACATCCTGTCAAGAACAAGGAGACCGAGGATCTCCAGTTGAATGCAGCATCTAAGATTACCCTGCCCTCCCCTTCAGGTTTGCATTCATCACCTCCGAAAGGGAGGTGGGGTAATGATCAGGAGAAAGCTGAGCATTTAGAAGGTGAAGTTTATGTTCCAGCTCGCAATATATCGTCTTCAAGATGGGCAGCTGGAGATAACTCTCCTGGTGATGAGGGTGAGATCCTCAATGATGAGGAAATGCCCAAACGGAGGAGGAAGGTGTCTCCTGAGTTCTTGGATGGCAGACTAAGGAACAAGTTATTGAGCCCTGTGGAATCCAAGATAGAAGCTATTGAAGGAGCTAGAGCCAGATCATCTGAATCTGAAGAAAGAGGTGTCCGTGGGAAAACCTCCAGCAGTGATGATCATCCTGGTATCGAGTCAGAGAAGGATGACTTAATGGAGGTTGATCCTCAAGGTGGGAAAAGTGAAACCAGTGTCAGTCACTCGGACACGGAATATGGAGATGAAGACGATGGTCGGGAGACTCCAGAACCTCATTCTCCACCTCAAAGAACTGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAGATAGATGAAGGAACATATGGTGTTGTATATAGGGCTAGGGATAAAAAGACTGGAGAAATTGTAGCATTGAAGAAGGTCAAGATGGAGAAGGAAAAAGAGGGCTTCCCACTGACTTCTCTTAGGGAAATAAACATTCTTCTTTCTTTTCACCACCCATCCATAGTTGATGTTAAAGAAGTAGTGGTAGGAAGTAGCCTTGATAGCATTTTCATGGTCATGGAATATATGGAGCACGACCTTAAAGGACTAATGGAAGCAATGAAGCAACCTTTCAGCCAGAGTGAAGTGAAGTGCTTGATGATCCAGCTTTTAGAAGGTGTGAAGTATCTTCACGACAACTGGGTGCTTCATAGGGATTTAAAGACATCAAATCTGCTTCTAAATAATAGGGGTGAGCTCAAAATTTGTGATTTTGGCTTGGCTCGTCAGTATGGGAGTCCTTTAAAGCCATATACACACCTGGTGGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTGGGGTCAAAACAGTATTCAACAGCCATAGACATGTGGTCTCTAGGTTGTATAATGGCTGAGCTATTATCTAAGGAACCACTGTTTAATGGGAGAACGGAGTTTGATCAACTTGACAAGATTTTTCGGATTCTAGGCACCCCTAATGAAGCAATTTGGCCTGGTTTCTCGAAATTACCTGGAGTCAAGGTCAATTTTGTTAAACACCAGTACAACCTCCTGCGTAAAAAGTTTCCTGCCACATCGTTCACGGGATCTCCTGTTCTTTCTGATTCAGGATTTGATTTGTTGAACAAGCTTCTAACATATGACCCTGAAAAGCGGATCACTGCCGAAGCTGCTCTAAATCATGAGTGGTTCCGTGAGGTTCCTCTTCCCAAAAGTAAAGAATTCATGCCTACATTTCCTGCTCAACACGCTCAGGACAGGCGTGTGCGGAGAATATACAAGAGTCCAGATCCTTTAGAAGAGCAGCGCAGGAAGGAGTTGCAGCAGGGTGAATCAGGGACTGGTGGAATTTTTGGCTAA 2241 0.465 MAAGRHGGYRENEFRDRESKLEGSRRGFANSKEDYDRVRNGGGDVVRDGSRDRVRVRQRDIKEREGVNGGYRSSSSRSDSGSSGLGPRRCGFSVKAMDREPGELSSESGSDDAIESELGAKDSEVAKLEGTRTRSPPVPERKRKFSPIVWDQDDKDVSESSKVRVSASTVVTAALPPPPPLPKAFHQSQSPNAPNGGVEIHPVKNKETEDLQLNAASKITLPSPSGLHSSPPKGRWGNDQEKAEHLEGEVYVPARNISSSRWAAGDNSPGDEGEILNDEEMPKRRRKVSPEFLDGRLRNKLLSPVESKIEAIEGARARSSESEERGVRGKTSSSDDHPGIESEKDDLMEVDPQGGKSETSVSHSDTEYGDEDDGRETPEPHSPPQRTVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMIQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGRTEFDQLDKIFRILGTPNEAIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKSKEFMPTFPAQHAQDRRVRRIYKSPDPLEEQRRKELQQGESGTGGIFG 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02045 746 Gene3D Transferase(Phosphotransferase) domain 1 483 722 - -
Phco4g02045 746 MobiDBLite consensus disorder prediction 217 388 - -
Phco4g02045 746 PANTHER CELL DIVISION PROTEIN KINASE 398 697 - -
Phco4g02045 746 SUPERFAMILY Protein kinase-like (PK-like) 392 697 IPR011009 -
Phco4g02045 746 MobiDBLite consensus disorder prediction 1 201 - -
Phco4g02045 746 MobiDBLite consensus disorder prediction 721 746 - -
Phco4g02045 746 Pfam Protein kinase domain 400 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02045 746 MobiDBLite consensus disorder prediction 8 67 - -
Phco4g02045 746 MobiDBLite consensus disorder prediction 235 249 - -
Phco4g02045 746 MobiDBLite consensus disorder prediction 721 735 - -
Phco4g02045 746 MobiDBLite consensus disorder prediction 69 83 - -
Phco4g02045 746 FunFam Cyclin-dependent kinase G-2 483 722 - -
Phco4g02045 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Phco4g02045 746 CDD STKc_CDC2L1 394 691 IPR045267 GO:0004674|GO:0005524|GO:0006468
Phco4g02045 746 MobiDBLite consensus disorder prediction 114 161 - -
Phco4g02045 746 ProSiteProfiles Protein kinase domain profile. 400 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02045 746 MobiDBLite consensus disorder prediction 363 380 - -
Phco4g02045 746 MobiDBLite consensus disorder prediction 311 352 - -
Phco4g02045 746 MobiDBLite consensus disorder prediction 276 294 - -
Phco4g02045 746 Gene3D Phosphorylase Kinase; domain 1 385 482 - -
Phco4g02045 746 SMART serkin_6 400 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02045 746 FunFam cyclin-dependent kinase G-2 isoform X1 385 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02045 Phco-Chr4 40619175 40622411 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Phco4g02045 Pkinase 2e-75 CL0016