Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01988 ATGCAGATAATGGAATACCACGATGACTTAGGCCTTGATGATATTAGTCTGCTTGAAGAGGGTTCCACGTCAATCCCTACTGATGACACCATCGCGGATATTGTTGACTCTTCTGTGCCTGCAGTTGGAATGTCTTTTGACAGTGCAGAAGCTGTGAGAACCTTCTACAGAGAATATGGAATAAAAATGGGTTTTGGAACTAGGATACGAAGCTCTAAAAAGGGAAAAGACAATGAAATCAGGTACTTCATGTTAGTGTGTTCTAGGGAGGGTAAATACATCTCTCCTCTCCCTTCAGAAGTAGAGACTCTTCCCACCCTCACCAATGAATGTCAGGCAAGGATAAGTGTTGCAAAGAAGGATTCCAAATGGTATATCATGTCTGTCATTTACGAACATTCCCATGACCTAAGTCCAACAAAGTCAAGGTTATTCCGTGGGAATAGGAAAATTAGTCTCAGTGCGAAAAGAACCCTTGACCTTAACGACGATGCAGGAGTACGCGTTAATAAGACTTACCGATCTCTAGTAAGTGCTGCTGGAGGTTACGAGAACATGTCATTTGTTGAGCGTGACGTCCGAAACTATGTAAGTCAGCATAGACGTGCCTTGGGGAAGGATAGGGATGGTCGGACATTATTGGCCCACTTTTCACGCATGCGAGAATTGAATAGGGATTTCTTCTTTGAAATCGACATCAATGATGAAAATCACATTAGAAATGTCTTTTGGGCAGATGCTAGAAGCCGGGCTGCTTGTGAGCATTTTGGAGACGTGGTATCATTTGATACAACATACCTTACCAATAAATATGACATGTCGTTCGCTCCATTTGTTGGTGTTAATCACCACGGTCAGTCAATCCTATTAGGTTGTGGACTTTTGTCCTCCGAAGACACTGAGACATTTATATGGCTATTTAAGTGTTGGTTACGTTGTATGTCCTACAAGGCCCCAGCTGGCATTGTTACTGACCAGTGCAGGGCAATGAAGAATGTTGTTGCTGTTGTCTTCCCTGAAACACGTCATAGATGGTGTTTGTGGCACATCATGAAGAAAATACCAGAGAAATTGGCATCATATCAGGATTACAAGAATATGAAACATCAAATGAAGGTTGTTGTGTATGAATCCATGAGTGTGGCTGAATTTGAATGTAATTGGGAGAAATTTATAACATCATTTCGATTAATGAATAACGAATGGTTGGCAACACTTTATGAGGAACGTCAAAGATGGGTCCCGTGTTATTTGAAAGGACAATTTTGGGCTAGAATGTCCACAACTCAGCGAAGTGAAGGCATGAATGCTTTCTTTGATGGATATATTAACTCCAGTACAACCCTCCAACAGTTTGTCCATCAGTATGACAATGCTTTACAATAG 1386 0.4141 MQIMEYHDDLGLDDISLLEEGSTSIPTDDTIADIVDSSVPAVGMSFDSAEAVRTFYREYGIKMGFGTRIRSSKKGKDNEIRYFMLVCSREGKYISPLPSEVETLPTLTNECQARISVAKKDSKWYIMSVIYEHSHDLSPTKSRLFRGNRKISLSAKRTLDLNDDAGVRVNKTYRSLVSAAGGYENMSFVERDVRNYVSQHRRALGKDRDGRTLLAHFSRMRELNRDFFFEIDINDENHIRNVFWADARSRAACEHFGDVVSFDTTYLTNKYDMSFAPFVGVNHHGQSILLGCGLLSSEDTETFIWLFKCWLRCMSYKAPAGIVTDQCRAMKNVVAVVFPETRHRWCLWHIMKKIPEKLASYQDYKNMKHQMKVVVYESMSVAEFECNWEKFITSFRLMNNEWLATLYEERQRWVPCYLKGQFWARMSTTQRSEGMNAFFDGYINSSTTLQQFVHQYDNALQ 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01988 461 Pfam MULE transposase domain 259 353 IPR018289 -
Phco4g01988 461 Pfam FAR1 DNA-binding domain 54 138 IPR004330 -
Phco4g01988 461 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 461 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01988 Phco-Chr4 39533318 39534703 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Phco4g01988 MULE 2.2e-32 CL0219