Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01957 ATGAGTTCGGGAAGCCATAGTGAGAAGGAGAAGGAGAAGGAGAAGCAGAGGGTGAGTCGAACGTCGTTGATACTGTGGCACGCTCACCAAAACGACGCCGCAGCAGTGCGGAAGCTCCTGCAAGAAGATCCTTCGCTGGTTACGGCAAGGGATTACGACAACCGCACCCCGCTCCACGTCGCATCCCTGCACGGCTGGATCGAAGTCGCCACGTGTTTGATCGAATTCGGCGCCGATGTCAACGCGCAAGATCGTTGGAAAAACACTCCTCTGGCGGATGCGGAAGGAGCTAAGAAGACTGATGTGATCGAGCTTTTGCAATCTCACGGAGGCTTGTCTTATGGGCAAACTGGAAGCCATTTTGAACCGAAGCCTGTTCCGCCGCCGTTGCCGAATAAGTGTGACTGGGAAATCGAACCTACCGAACTTGACTTCTCCAACTCCGCGAGAATCGGAAAGGGGTCTTTTGGTGAGATTTTAAAAGCCCATTGGCGTGGAACACCAGTCGCTGTTAAACGTATTCTTCCATCTCTTTCAGAAGATAGATTGGTGATTCAGGACTTCAGGCATGAGGTCAATTTGTTAGTGAAGCTTCGACACCCCAATATAGTTCAGTTTCTTGGAGCTGTTACAGACAGGAAGCCCCTTATGTTAATTACTGAGTATCTAAGAGGGGGTGATCTTCATCAGTACCTCAAAGAAAAAGGTGCACTTAGTCCAGCAACAGCTATCAACTTTTCCATGGATATTGTGAGAGGAATGGCCTATCTCCACAATGAACCAAATGTTATAATTCATCGGGACCTAAAGCCAAGGAATGTTCTTTTAGTCAATTCTAGTGCCGACCATTTAAAAGTTGGAGATTTTGGATTGAGTAAGCTTATCACTGTCCAGAGCTCTCATGATGTATACAAGATGACCGGTGAAACTGGGAGCTACCGCTACATGGCTCCTGAAGTTTTCAAACATCGGAGATATGATAAGAAGGTTGATGTGTACTCCTTTGCAATGATTTTGTATGAGATGCTTGAAGGTGAACCACCTTTTGCAAATCTCGAACCTTATGATGGAGCAAAACGCGCTGCTGAGGGACAAAGGCCTTCATTTCGGTCAAAGGGTTATATCAATGAATTACAAGAATTAACGGAGCAGTGTTGGGCTCATGACGTGAATCAGAGACCACCCTTCATAGAGATCCTTAAACGTCTCGAAAAGATCAAGGAGAATTTACCTTCAGATCATCACTGGCATTTGTTTGCATCATAA 1266 0.4629 MSSGSHSEKEKEKEKQRVSRTSLILWHAHQNDAAAVRKLLQEDPSLVTARDYDNRTPLHVASLHGWIEVATCLIEFGADVNAQDRWKNTPLADAEGAKKTDVIELLQSHGGLSYGQTGSHFEPKPVPPPLPNKCDWEIEPTELDFSNSARIGKGSFGEILKAHWRGTPVAVKRILPSLSEDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTDRKPLMLITEYLRGGDLHQYLKEKGALSPATAINFSMDIVRGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLITVQSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVYSFAMILYEMLEGEPPFANLEPYDGAKRAAEGQRPSFRSKGYINELQELTEQCWAHDVNQRPPFIEILKRLEKIKENLPSDHHWHLFAS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01957 421 PRINTS Tyrosine kinase catalytic domain signature 374 396 IPR001245 GO:0004672|GO:0006468
Phco4g01957 421 PRINTS Tyrosine kinase catalytic domain signature 258 276 IPR001245 GO:0004672|GO:0006468
Phco4g01957 421 PRINTS Tyrosine kinase catalytic domain signature 220 233 IPR001245 GO:0004672|GO:0006468
Phco4g01957 421 Gene3D Transferase(Phosphotransferase) domain 1 225 417 - -
Phco4g01957 421 ProSitePatterns Protein kinases ATP-binding region signature. 151 172 IPR017441 GO:0005524
Phco4g01957 421 CDD STKc_MAP3K-like 151 403 - -
Phco4g01957 421 Gene3D Phosphorylase Kinase; domain 1 130 224 - -
Phco4g01957 421 ProSiteProfiles Ankyrin repeat region circular profile. 53 85 - -
Phco4g01957 421 Gene3D - 2 120 IPR036770 -
Phco4g01957 421 SMART ANK_2a 53 82 IPR002110 GO:0005515
Phco4g01957 421 SMART serkin_6 145 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01957 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Phco4g01957 421 SUPERFAMILY Protein kinase-like (PK-like) 135 416 IPR011009 -
Phco4g01957 421 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 77 408 - -
Phco4g01957 421 FunFam serine/threonine-protein kinase STY46-like 138 224 - -
Phco4g01957 421 Pfam Ankyrin repeats (3 copies) 21 84 IPR002110 GO:0005515
Phco4g01957 421 ProSiteProfiles Protein kinase domain profile. 145 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01957 421 PIRSF ILK 1 421 - -
Phco4g01957 421 FunFam Integrin-linked protein kinase family 224 419 - -
Phco4g01957 421 ProSiteProfiles Ankyrin repeat profile. 53 85 IPR002110 GO:0005515
Phco4g01957 421 SUPERFAMILY Ankyrin repeat 24 111 IPR036770 -
Phco4g01957 421 Pfam Protein tyrosine and serine/threonine kinase 148 403 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01957 Phco-Chr4 38712366 38718880 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Phco4g01957 PK_Tyr_Ser-Thr 1.4e-62 CL0016