Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01932 ATGGTTGGCGGTGGAAATGGAGAGGGAGAGGCAGCACCACCCTCCAAGGCCGCGCGTTCCAGAACTGATCTCCAACTACGCGCTTCCACGGAGAGCGTTTTCAACTGCGGAGACACCGCAGGTTATAGCCCCGGTCCCATGACTCTGTTTTCTAGCTTGTTCGGCGATGGAGATGGCGATGAGTATAAGTCGTTCTCGGAGTTCCTTGCCGGCGCCATGGTGGACCCCATTCCTCTTCGGTCTTTTCCAGTTTCAGCTTCTCAAGGACAGTTTGGAATGACACAGCAGCAAATGCTAGCACAGGTCACAGCCCACACCAATGTGCAAATCCAAGCTGAACATGCTACCTCATTGACACAGGTTCCTACAACTATTTCCACCACGGCACGGCAGCTGATACCACTACCACCATCAATGCTAGCTTCTGAGGTGACAGAATCCTTTGGTTTTTCTCACTCTCAACAGAAATTGCACTTTCCTTCTATCATCGTTGACAAGCCTAATGATGATGGCTACAACTGGAGGAAGTATGGGCAGAAACCTGTAAAGGGTAGTGACTTCTCTCGAAGTTACTACAAATGCACACATCCAAATTGCCCTGTCAAGAAAAAGCTTGAGCTATCTCTTCAGGGTCATGTAACTGCAATTATTTATAAAGGAGAGCACAACCATCAACGTAAGACCACAAAAGGCACCCTAACTTCAACTGACAATTCAGATAGGTTGAAAGAAGAGATGAGTTCTCACTCGATGTCCCAGAAGGATCTAGAATCTAGTCAGGCTGAACATGGGTCTGGAACAAGTGACAGTGAGGAAGTAGGTTATCATGAAACTAAAGTGGATGAGAAAAATGATGAACCTGATCCCAAGAGGAGAAACACAGAAGCCAGACTCCAGGATCCAGCTTCTTTAGATTTGCATAGAACTGTGGCAGAGCCTAGGATCATTGTGCAAACAACAAGTGAAGTGGATCTCTTGGATGATGGATATAGATGGCGCAAATATGGGCAGAAAGTTGTCAAAGGCAACCCATATCCAAGGAGCTATTACAAGTGCACAACCCCAGGTTGCAATGTTCGGAAGCATGTTGAGAGGGCTTCAACGGATCCTAAAGCTGTAATAACAACATATGAAGGAAAACATAATCATGATGTACCAACAGCTAAGACTAATAGTCACACACTTGCCAACAAAACTGCATCACAGCTAAAACCAAAAAATGTCACCGATGAGAAGCATGGTTTCAGCAGCAGGGGTGTTGGGGGCAATGAGCAGCAACCTGTGGCAAGTCTAAGATTGAAGCAAGAGAAGATAACTTAG 1320 0.4621 MVGGGNGEGEAAPPSKAARSRTDLQLRASTESVFNCGDTAGYSPGPMTLFSSLFGDGDGDEYKSFSEFLAGAMVDPIPLRSFPVSASQGQFGMTQQQMLAQVTAHTNVQIQAEHATSLTQVPTTISTTARQLIPLPPSMLASEVTESFGFSHSQQKLHFPSIIVDKPNDDGYNWRKYGQKPVKGSDFSRSYYKCTHPNCPVKKKLELSLQGHVTAIIYKGEHNHQRKTTKGTLTSTDNSDRLKEEMSSHSMSQKDLESSQAEHGSGTSDSEEVGYHETKVDEKNDEPDPKRRNTEARLQDPASLDLHRTVAEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPTAKTNSHTLANKTASQLKPKNVTDEKHGFSSRGVGGNEQQPVASLRLKQEKIT 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01932 439 ProSiteProfiles WRKY domain profile. 321 386 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g01932 439 MobiDBLite consensus disorder prediction 252 267 - -
Phco4g01932 439 FunFam WRKY transcription factor 154 228 - -
Phco4g01932 439 MobiDBLite consensus disorder prediction 269 302 - -
Phco4g01932 439 SUPERFAMILY WRKY DNA-binding domain 318 386 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco4g01932 439 SMART WRKY_cls 326 385 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g01932 439 SMART WRKY_cls 168 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g01932 439 MobiDBLite consensus disorder prediction 220 302 - -
Phco4g01932 439 MobiDBLite consensus disorder prediction 382 439 - -
Phco4g01932 439 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 115 402 IPR044810 GO:0003700
Phco4g01932 439 Pfam WRKY DNA -binding domain 327 384 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g01932 439 Pfam WRKY DNA -binding domain 169 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g01932 439 MobiDBLite consensus disorder prediction 388 404 - -
Phco4g01932 439 MobiDBLite consensus disorder prediction 237 251 - -
Phco4g01932 439 ProSiteProfiles WRKY domain profile. 168 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g01932 439 Gene3D WRKY domain 311 387 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco4g01932 439 Gene3D WRKY domain 157 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco4g01932 439 FunFam WRKY transcription factor 33 313 379 - -
Phco4g01932 439 MobiDBLite consensus disorder prediction 1 23 - -
Phco4g01932 439 SUPERFAMILY WRKY DNA-binding domain 166 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01932 Phco-Chr4 38296141 38298687 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco4g01932 WRKY 1e-25 CL0274