Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01898 ATGTCTTCTCGCAGATCAAATGGAAGAGTAGCTAGTGGTAGAGTTGAATTAGAAAAGGAAGTTCCCTTACCACAGCTGCCTGATCATACAACAAATTTGCAATGGGATGAGGTTAAACCACTTTCAGGAAAACCATACAGTCATAGTATTCTTGCACCTTCAAATCTCTGTCCCCGTTATTATATGTGGCTTCCGTCCAACTTACGGTTAGAACTTCCTTCTTGTGAGGTCCCCACCATACTCACCTATATGGGCAAGAGCTGGGACATGGTGTATTGTGGACAAAACAAACAGCAGGTTTTTAATGTCGCGGGATGGAAAAGGTTTGCTGTTGAAAATTGTTTGAGGATTGGAGATGCATGCATTTTTGAGCTCATGGAAAGCAGTGACAAGAAAATAATCTTTGAAGTTCAGATTCTTAGAGGTGACATTCCATCCGATATTCTTGAAAATGAAATGATCACGGGTCAGAGTCGGGAAATGCCAATTGTCCTTAACTAG 501 0.4132 MSSRRSNGRVASGRVELEKEVPLPQLPDHTTNLQWDEVKPLSGKPYSHSILAPSNLCPRYYMWLPSNLRLELPSCEVPTILTYMGKSWDMVYCGQNKQQVFNVAGWKRFAVENCLRIGDACIFELMESSDKKIIFEVQILRGDIPSDILENEMITGQSREMPIVLN 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01898 166 SMART B3_2 46 143 IPR003340 GO:0003677
Phco4g01898 166 Gene3D - 34 143 IPR015300 -
Phco4g01898 166 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 42 145 IPR044837 -
Phco4g01898 166 Pfam B3 DNA binding domain 79 136 IPR003340 GO:0003677
Phco4g01898 166 CDD B3_DNA 50 141 IPR003340 GO:0003677
Phco4g01898 166 ProSiteProfiles B3 DNA-binding domain profile. 85 143 IPR003340 GO:0003677
Phco4g01898 166 SUPERFAMILY DNA-binding pseudobarrel domain 45 141 IPR015300 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phco4g01898 B3 6.7e-11 CL0405