Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01895 ATGAGGGGACCCAATGGAACATCGATGGAAATGTTTGTCGATGGAAATGTGAAGAACAGCCAAAGCTATAAATCTTCCTCCTTCTTGCTCTACCATTCTCATGTCCTATTAGAACTCCACAACAAGGGAAACATGAAAGATGGTGGTAGGAAGCAGGGTGCACCCTCACCCTGTGCTGCATGCAAGCTCCTTCGGAGAAGATGTGCTCAAGATTGTGTTTTTGCTCCTTATTTTCCTGCTGATGAACCCCACAAGTTTGCAAATGTCCACAGAGTCTTTGGTGCCAGCAATATCAACAAGATGCTTCAGGAGTTACCAGAGCATCAGAGAGGAGATGCAGTGAGCAGCATGGTGTATGAGGCAAATGCAAGAGTGAGGGACCCTGTGTATGGGTGTGTAGGGGCCATTTCATCTCTTCAGCAACAGATTGATGTGTTGCAGACCCAATTGGTAGTGGCTCAAGCTGAAGCTGTGCACCTCAGAGTGCGCCAGAGTGCATCCCTCTACAGCCCCACCAGCCCTACCAACAGTGCCTCTCCATCATCCAAGATCATTCACTCACAACCTAAACCTATTTTTGACATGGACATGGACATGGTGGTGGACCAGACCACCTATAGTGATTCAATGTGGTGA 636 0.4796 MRGPNGTSMEMFVDGNVKNSQSYKSSSFLLYHSHVLLELHNKGNMKDGGRKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPHKFANVHRVFGASNINKMLQELPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLVVAQAEAVHLRVRQSASLYSPTSPTNSASPSSKIIHSQPKPIFDMDMDMVVDQTTYSDSMW 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01895 211 ProSiteProfiles LOB domain profile. 56 157 IPR004883 -
Phco4g01895 211 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 54 179 - -
Phco4g01895 211 Coils Coil 136 156 - -
Phco4g01895 211 Pfam Lateral organ boundaries (LOB) domain 57 154 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01895 Phco-Chr4 37619840 37623370 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco4g01895 LOB 2e-43 No_clan