Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01773 ATGAGGAAGCCTACTTGTGATATCAAAGACTTGAACAAAGGAGCTTGGTCCAAACAAGAAGACCAGAAACTCATAGATTATATCAACAAACACGGCGAGGTTTGTTGGCGTACACTTCCTCAGGCTGCAGGTTTACTTCGGTGTGGTAAAAGTTGTAGGCTGAGATGGATAAACTATCTAAGGCCAGACCTTAAAAGAGGCAACTTTGCTGAAGATGAAGAAGATCTCATTATCAAGCTTCATGCGCTACTTGGCAACCGGTGGTCACTTATAGCCGGAAGATTGCCTGGTCGTACAGATAACGAAGTGAAGAACTATTGGAATTCTCATATAAAAAGAAAGCTAATTAGCAAAGGCATTGATCCAAATAATCATCGATTAGACCATAAAGTCCCTTTCCTTCAGAATCCACCCATGTCTGATGATACTTCAGAACCCTTTGGAACGAAAGACGTTGATAAGAACGAGCCATGTAAATCACCTCATCATGTTTACCATTGTGGTGAAGTCTCAGATGATGTAAGTGGCGAGGCTCAGTCATCATATGCCCTTCCGGATTTAAACCTTGATCTCTCTATCGCCATCCCTTCAGAATCACACACTATTTCTGAAAACAATATAAAACCTTTTCGCGAATCTTATTCATCCAGGAAACTGCCTTATGATTCTCCTTCAACACTTCTTCTGTTTCAATAA 696 0.408 MRKPTCDIKDLNKGAWSKQEDQKLIDYINKHGEVCWRTLPQAAGLLRCGKSCRLRWINYLRPDLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIKRKLISKGIDPNNHRLDHKVPFLQNPPMSDDTSEPFGTKDVDKNEPCKSPHHVYHCGEVSDDVSGEAQSSYALPDLNLDLSIAIPSESHTISENNIKPFRESYSSRKLPYDSPSTLLLFQ 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01773 231 FunFam MYB transcription factor 67 127 - -
Phco4g01773 231 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Phco4g01773 231 FunFam MYB-related transcription factor 12 65 - -
Phco4g01773 231 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 146 - -
Phco4g01773 231 CDD SANT 68 111 IPR001005 -
Phco4g01773 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Phco4g01773 231 CDD SANT 15 60 IPR001005 -
Phco4g01773 231 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Phco4g01773 231 Gene3D - 5 66 - -
Phco4g01773 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Phco4g01773 231 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Phco4g01773 231 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Phco4g01773 231 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Phco4g01773 231 Gene3D - 67 131 - -
Phco4g01773 231 SMART sant 12 62 IPR001005 -
Phco4g01773 231 SMART sant 65 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01773 Phco-Chr4 25503645 25504723 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phco4g01773 Myb_DNA-binding 2.1e-14 CL0123