Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01759 ATGGCGGGCGGCGGAAGTGGGAACCGACCGCCGTGGAAGGAGGCGGCGCCGCCTCGACCCACCATCAGTCTCCCTCCAAGGGCTGCTTCCATGGAGACCCTTTTCAATGGCGGCTTCAGCCCTGGTCCCATGACTCTTCTCTCTGGCTTTTTGACTGATGGGGATGACTGCAACAAGTCCTTCTCTCAGCTGCTCGCCGGAGCCATGGCTTCTCCGGTGGCCGCCGCCGTGCACGACTCATCTGGCTTCTTTTCACCTTCTCAGGTGTCATTTGAAATGACACACCAGCAGGCCCTAGCCCAAGTTTCAGTGCAAGCTTCACAAGCTAACACAAACATGAATATCCACCCTGAACATTCATTGTCTGTATCAGTATCATCACCTACCTCATTCACACAGGTTCCTGCAGCTACTTCCAATACTAAACAACAGCTCATTCCACCCTTAACTGCAGACTCTCGGGCCACAATGACCGAATTCGCTCATCATTCTCACTCTGAACAAAAATTGCAATCTTCATCACTGAATGTTGATAAGCCTGCAGATGATGGCCACAACTGGAGGAAGTATGGACAGAAACAGGTGAAGGGTAGTGAATTTCCTCGAAGTTATTACAAATGCACACATCCACACTGTCCTGTCAAGAAAAAGGTTGAGCGTTCACTTGAGGGTCATGTAACTGCAATTATTTATAAAGGAGAACACAACCATCAACGTCCTCTTCCTAACAAGCGCTCAAAAGATGCTGTGACTTCAAATGAAAATTCAAATATGCATTGGAATGCTTCTGCTTATCAAGGGACTACTAAGATGGATCCAGAGTCAAGTCAGGCAACAGCTGATCATCTATCAGGAAGTGACAGTGAGGAAGTAGGTGACCATGAAGCTGAAGAGGATGAGAAAAATGTTGAGCCTCACCCCAAGAGGAGTAAAACAGAAGTCACAAATTTAGATCCAACATTTTCACATAGGACTGTCACTGAGCCTAGAATCATTGTGCAAACAACAAGTGAAGTTGATCTTTTAGATGATGGTTACAGATGGCGAAAGTATGGGCAGAAAGTAGTTAAAGGCAACCCTTATCCGAGGAGTTATTACAAATGTACAACCCCAGGTTGTAAGGTACGAAAGCATGTTGAGAGGGCTTCAACAGATCCTAAAGCTGTCATAACAACTTACGAAGGAAAACACAATCATGATGTTCCAGCAGCTAAGATCAGCAGCCACGTTATGGCTGGTAACACTTCACAGATAAAACCACAGAACTCCAATCCTGGAAAAAATAGTTTTGGCACAGATATTGGTGGCAATGAACAACAGCCGGTTGCACGGCTACGGTTGAAAGAAGAGAAGATAACCTAG 1362 0.4618 MAGGGSGNRPPWKEAAPPRPTISLPPRAASMETLFNGGFSPGPMTLLSGFLTDGDDCNKSFSQLLAGAMASPVAAAVHDSSGFFSPSQVSFEMTHQQALAQVSVQASQANTNMNIHPEHSLSVSVSSPTSFTQVPAATSNTKQQLIPPLTADSRATMTEFAHHSHSEQKLQSSSLNVDKPADDGHNWRKYGQKQVKGSEFPRSYYKCTHPHCPVKKKVERSLEGHVTAIIYKGEHNHQRPLPNKRSKDAVTSNENSNMHWNASAYQGTTKMDPESSQATADHLSGSDSEEVGDHEAEEDEKNVEPHPKRSKTEVTNLDPTFSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCKVRKHVERASTDPKAVITTYEGKHNHDVPAAKISSHVMAGNTSQIKPQNSNPGKNSFGTDIGGNEQQPVARLRLKEEKIT 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01759 453 ProSiteProfiles WRKY domain profile. 337 402 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g01759 453 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 85 423 IPR044810 GO:0003700
Phco4g01759 453 MobiDBLite consensus disorder prediction 415 436 - -
Phco4g01759 453 SUPERFAMILY WRKY DNA-binding domain 179 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco4g01759 453 SUPERFAMILY WRKY DNA-binding domain 334 402 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco4g01759 453 MobiDBLite consensus disorder prediction 231 253 - -
Phco4g01759 453 MobiDBLite consensus disorder prediction 267 284 - -
Phco4g01759 453 FunFam WRKY transcription factor 33 329 395 - -
Phco4g01759 453 SMART WRKY_cls 181 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g01759 453 SMART WRKY_cls 342 401 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g01759 453 MobiDBLite consensus disorder prediction 298 313 - -
Phco4g01759 453 MobiDBLite consensus disorder prediction 415 453 - -
Phco4g01759 453 Gene3D WRKY domain 165 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco4g01759 453 Gene3D WRKY domain 327 403 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco4g01759 453 FunFam WRKY transcription factor 151 241 - -
Phco4g01759 453 MobiDBLite consensus disorder prediction 267 317 - -
Phco4g01759 453 ProSiteProfiles WRKY domain profile. 182 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g01759 453 Pfam WRKY DNA -binding domain 343 399 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g01759 453 Pfam WRKY DNA -binding domain 182 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g01759 453 MobiDBLite consensus disorder prediction 159 195 - -
Phco4g01759 453 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01759 Phco-Chr4 22749921 22754108 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco4g01759 WRKY 1.3e-25 CL0274