Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01746 ATGAGCACCGGCAGCAGCGGAACGTCCGGCACGGCGGCGAAGGAGAAGGCTCGGGTGAGTCGAACGTCTCTCATTCTGTGGCACGCGCACCAAAACGACGCTGTGGCTGTGCGGAAGCTTCTCGAGGAGGATCCATCGCTGGTGAAGGCTAGGGATTACGACAGCCGCACGCCGCTGCACGTGGCTTCGCTCCACGGTTGGGTCGAGGTTGGTAATTGCTTGCTCGAATTCGGTGCTGACATAAATGCTTTGGATCGTTGGAAAAACACTCCTTTGGCTGATGCAGAAGGAGCTAAAAAATTGGCGATGATTGAGCTTTTGAAGTTAAATGGAGGCTTGTCTTATGGCCAAACTGGAAGTCATTGTGAACATGGCCCTGTTCTTCCCCCATTGCCTAGCAAATGTGACTGGGAAGTTGACCCATCTGAGCTGGACTTCTCTAATTTAGTTTGCATTGGAAAGGGATCTTTTGGCGAGATCTTAAAAGCCCATTGGCGTGGAACGCCAGTTGCCGTCAAACGTATTCTTCCATCTCTGTCAGATGATAGATTGGTGATTCAGGACTTCAGGCACGAGGTTAATTTACTTGTGAAACTTCGACACCCTAATGTTGTTCAATTTCTTGGAGCTGTTACAGACAAGAAGCCCCTTATGTTAATTACTGAGTATCTAAGAGGAGGCGATCTTCATAAGTACCTCAAGGACAAAGGTTCTCTTAGTCCATCAACAGCTATCAACTTTGGCTTGGATATTGCTCGAGGGATGGCCTATCTTCACAATGAACCAAATGTTATTATTCATCGAGACCTAAAGCCAAGGAATGTTCTTTTAGTCAATTCTAGTGCGGACCATTTAAAAGTTGGTGATTTTGGACTTAGTAAGCTTATTAAGGTCCAAAGTTCTCATGATGTATACAAGATGACTGGTGAAACTGGAAGCTACCGCTACATGGCTCCTGAAGTTTTCAAACACCGGAGATATGATAAGAAGGTTGACGTGTTCTCCTTTGCAATGATTCTGTATGAGATGCTTGAAGGTGAACCGCCTTTTTCAAATTATGAACCATATGATGGAGCCAAATATGTGGCAGAAGGACACAGACCTTCTTTTCGGGCAAAGAGTTACACCTCTGACCTGCGAGATTTAACAGATGAGTGCTGGGCTTCTGACATAAATCAAAGACCTTCGTTCATAGAGATCCTTAAACGGCTTGAAAAGATCAAGGAAAATTTGCCTTCAGATCATCACTGGAGCTTGTTCGCTTCATGA 1269 0.4555 MSTGSSGTSGTAAKEKARVSRTSLILWHAHQNDAVAVRKLLEEDPSLVKARDYDSRTPLHVASLHGWVEVGNCLLEFGADINALDRWKNTPLADAEGAKKLAMIELLKLNGGLSYGQTGSHCEHGPVLPPLPSKCDWEVDPSELDFSNLVCIGKGSFGEILKAHWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNVVQFLGAVTDKKPLMLITEYLRGGDLHKYLKDKGSLSPSTAINFGLDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFAMILYEMLEGEPPFSNYEPYDGAKYVAEGHRPSFRAKSYTSDLRDLTDECWASDINQRPSFIEILKRLEKIKENLPSDHHWSLFAS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01746 422 PIRSF ILK 2 422 - -
Phco4g01746 422 Gene3D - 11 120 IPR036770 -
Phco4g01746 422 CDD STKc_MAP3K-like 152 404 - -
Phco4g01746 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Phco4g01746 422 ProSiteProfiles Ankyrin repeat profile. 54 86 IPR002110 GO:0005515
Phco4g01746 422 SUPERFAMILY Protein kinase-like (PK-like) 145 417 IPR011009 -
Phco4g01746 422 PRINTS Tyrosine kinase catalytic domain signature 375 397 IPR001245 GO:0004672|GO:0006468
Phco4g01746 422 PRINTS Tyrosine kinase catalytic domain signature 221 234 IPR001245 GO:0004672|GO:0006468
Phco4g01746 422 PRINTS Tyrosine kinase catalytic domain signature 259 277 IPR001245 GO:0004672|GO:0006468
Phco4g01746 422 Gene3D Phosphorylase Kinase; domain 1 130 225 - -
Phco4g01746 422 FunFam serine/threonine-protein kinase STY46-like 139 225 - -
Phco4g01746 422 SUPERFAMILY Ankyrin repeat 25 110 IPR036770 -
Phco4g01746 422 ProSitePatterns Protein kinases ATP-binding region signature. 152 173 IPR017441 GO:0005524
Phco4g01746 422 Gene3D Transferase(Phosphotransferase) domain 1 226 417 - -
Phco4g01746 422 ProSiteProfiles Ankyrin repeat region circular profile. 54 86 - -
Phco4g01746 422 ProSiteProfiles Protein kinase domain profile. 146 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01746 422 FunFam Integrin-linked protein kinase family 225 420 - -
Phco4g01746 422 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 73 409 - -
Phco4g01746 422 SMART serkin_6 146 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01746 422 Pfam Protein tyrosine and serine/threonine kinase 152 404 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01746 Phco-Chr4 21707226 21712789 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Phco4g01746 PK_Tyr_Ser-Thr 8e-63 CL0016