Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01699 ATGGGCTTGGGTGCTGAGAATGGTAAGGTGGTGGAGCCTTGGGATGTGTGCAAATCTAAGGGGAGGAAGAAGAAAAAAGGGGATGAGGAAGTGGAAGGGGCTGGGTCTGGTTGTTGGCTTAGGCTGAGGTTTATTGGCAGCTGCATTTCCTCAAGATCCAAGGTCGACACCTCTGTCAGTGGCAGTGGCACCAGTACTCATTATGCTGAAAGTAAATCAACTAATGATACTAGTAGAGACCAACCAACGGCTCCAGCAGTCTCTTCTACAACCACTAGTAATGCAGAAAGTAATTCATCCACTTCCAAACTTGAAGAGGAGCTTAAAATTGCTTCCAGGCTGCGAAAGTTCTCTTTCAATGATCTTAAGTTAGCTACCAGAAATTTTCGGCCTGAAAGTTTTCTTGGTGAAGGTGGGTTTGGTTGTGTTTTCAAGGGTTGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACGGTTGCTGTAAAAACCCTCAACCATGATGGGCTCCAGGGTCATAAAGAGTGGCTGGCTGAAGTAAATTTTCTTGGCGATCTAGTTCATCCGAACCTTGTTAAACTTGTAGGTTACTGCATTGAAGATGATCAAAGGTTGCTAGTGTACGAGTTCATGCCTCGGGGTAGTCTAGAAAATCATTTGTTTAGGAGATCCCTGCCTCTTCCATGGTCCATTAGAATGAAAATTGCCCTAGGAGCTGCTAAGGGTCTTGCTTTTCTTCATGAAGAAGCCGATCGACCAGTAATATATAGAGATTTTAAAACTTCAAATATACTATTAGATGCAGAGTATAATGCCAAGCTCTCAGACTTTGGTCTAGCCAAAGATGGCCCAGAAGGTGATAAAACACATGTGTCTACTCGAGTGATGGGAACCTATGGCTATGCAGCACCAGAATATGTCATGACAGGTCATCTTACATCAAAAAGTGATGTGTACAGTTTTGGAGTGGTACTACTTGAGATGTTGTCTGGCAGAAGATCCATGGACAAACACAGACCCAATGGTGAGCATAACCTTGTGGAATGGGCTCGGCCACATCTAGGAGAGAGGAGAAGGTTCTACAAGTTGATAGACCCTCGTTTGGAAGGCCACTTTTCGGTGAAAGGTGCTCAGAAAGCTGCCCAACTGGCTGCTCACTGCCTTTGTAGGGATCCAAAAGCCAGGCCTCTGATGAGTGAAGTTGTAGAAGCTTTAAAGCCTTTGCCAAACCTCAAGGACATGGCAAGCTCTTCATATTATTACCAGACAATGCAAGCTGACCGCATTGGAGCGAGCCCGAACACACGAAACGGGCGAACACAAGGAGCATTGCTCACCCGCAATGGACACCAGCAAAGGAGTCTTTCTATACCAAATGGTACCTATGCATCTCCATATCATCATCAGTTTCCTCAACCATCACCAAAACCCAATGGCAAAGCGTAG 1458 0.4547 MGLGAENGKVVEPWDVCKSKGRKKKKGDEEVEGAGSGCWLRLRFIGSCISSRSKVDTSVSGSGTSTHYAESKSTNDTSRDQPTAPAVSSTTTSNAESNSSTSKLEEELKIASRLRKFSFNDLKLATRNFRPESFLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEADRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLSGRRSMDKHRPNGEHNLVEWARPHLGERRRFYKLIDPRLEGHFSVKGAQKAAQLAAHCLCRDPKARPLMSEVVEALKPLPNLKDMASSSYYYQTMQADRIGASPNTRNGRTQGALLTRNGHQQRSLSIPNGTYASPYHHQFPQPSPKPNGKA 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01699 485 FunFam Probable serine/threonine-protein kinase PBL8 215 430 - -
Phco4g01699 485 CDD STKc_IRAK 135 412 - -
Phco4g01699 485 SUPERFAMILY Protein kinase-like (PK-like) 107 409 IPR011009 -
Phco4g01699 485 Pfam Protein tyrosine and serine/threonine kinase 134 409 IPR001245 GO:0004672|GO:0006468
Phco4g01699 485 Gene3D Phosphorylase Kinase; domain 1 88 214 - -
Phco4g01699 485 MobiDBLite consensus disorder prediction 451 472 - -
Phco4g01699 485 PANTHER OS01G0588500 PROTEIN-RELATED 92 412 - -
Phco4g01699 485 Gene3D Transferase(Phosphotransferase) domain 1 215 431 - -
Phco4g01699 485 ProSiteProfiles Protein kinase domain profile. 129 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01699 485 MobiDBLite consensus disorder prediction 54 101 - -
Phco4g01699 485 MobiDBLite consensus disorder prediction 451 485 - -
Phco4g01699 485 FunFam Serine/threonine-protein kinase BIK1 96 214 - -
Phco4g01699 485 ProSitePatterns Protein kinases ATP-binding region signature. 135 167 IPR017441 GO:0005524
Phco4g01699 485 MobiDBLite consensus disorder prediction 54 104 - -
Phco4g01699 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01699 Phco-Chr4 17950936 17954268 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phco4g01699 PK_Tyr_Ser-Thr 4.7e-46 CL0016