Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01697 ATGGACACCAAGTTCTGCTACTACAATAACTATAACGTGAATCAGCCATGCCATTTCTGCAAGCATTGCCATAGATACTGGACTGCAGGAGGAACCATGAGGAATGTGCCAGTTGGTGCAGGTCGCCGCAAGAACAAAAACACTTCTTCTGCTGCATCACATTATCGTCAAATCGTGGTTCCTGAGACCCTTCAGAACGGAACTTTGCACATTGCTGTGTTGACCTTTGGATCAGATTTCGCTCTCTGGGACTCCATGGCTTCTGTGTTGAGCCTTGCTGAGAAAACCCAAAATGGTGTCCTCAACGGGTTTCATTCACCTAAGCATAATGTTAGCACTGTTAATAATCATAATAGTGGGGATGATATTAACTCAGTTGGTGCTTCTGTTATGGCTTCAACTTTGTGTAAGAAGAGAGACAATGCTACTAGCTCTCATGATGAATCAGGGGATAAGATTTATCATCAAGGTTCTTTATCATCTTCTTCTCCTTGGCCTTATCCGTGGAACCCTACAATGACTCCTTCTGCTTTTTACCAACCTCTGTCATTCTACCCCACACAAGCATTTTGGGAATGCATGCCACCACCATCTTGGAGTGTAAATTACCAATCTGCTCCAAGTTCTGGTCCAAACTCACCAACCTTGGGAAACATTCAAGAGATGGAGACACCATATCTGCAATATATTTAA 693 0.4329 MDTKFCYYNNYNVNQPCHFCKHCHRYWTAGGTMRNVPVGAGRRKNKNTSSAASHYRQIVVPETLQNGTLHIAVLTFGSDFALWDSMASVLSLAEKTQNGVLNGFHSPKHNVSTVNNHNSGDDINSVGASVMASTLCKKRDNATSSHDESGDKIYHQGSLSSSSPWPYPWNPTMTPSAFYQPLSFYPTQAFWECMPPPSWSVNYQSAPSSGPNSPTLGNIQEMETPYLQYI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01697 230 ProSiteProfiles Zinc finger Dof-type profile. 1 47 IPR003851 GO:0003677|GO:0006355
Phco4g01697 230 MobiDBLite consensus disorder prediction 139 161 - -
Phco4g01697 230 PANTHER CYCLIC DOF FACTOR 2 1 220 IPR045174 GO:0003700|GO:0006355
Phco4g01697 230 Pfam Dof domain, zinc finger 1 47 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01697 Phco-Chr4 17857153 17861805 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phco4g01697 zf-Dof 8.4e-24 No_clan