Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01695 ATGCTGATTACTGAGTTCAGCCAGGAACTTGTAGAGATGGGCTTGGGTGCTGAGAATGGTAAGGTGGTGGAGCCTTGGGATGTGTGCAAATCGAAGGGGAGGAAGAAGAAGAAAGGGGATGAGGAAGTGGAAGGGGCTGGGTCTGGTTGTTGGCTTAGGCTGAGGTTTATTGGCAGCTGCATTTCCTCAAGATCCAAGGTCGATACCTCTGTCAGTGGCAGTGGCACCAGTACTCATTATGCTGAAAGTAAATCAACTAATGATACTAGTAGAGACCAACCAACCGCTCCAGCAGTCTCTTCTACAACCACTAGTATTGCAGAAAGTAATTCATCCACTTCCAAACTTGAAGAGGAGCTTAAAATTGCTTCCAGGCTGCGAAAGTTCCCTTTCAATGATCTTAAGTTAGCTACCAGAAATTTTCGGCCTGAAAGTTTTCTTGGTGAAGGTGGGTTTGGTTGTGTTTTCAAGGGTTGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACTGTTGCTGTAAAAACCCTCAACCACGATGGGCTCCAGGGTCATAAAGAGTGGCTGGCTGAAGTAAATTTTCTTGGTGACCTAGTTCATCCAAACCTTGTTAAACTTGTGGGTTACTGCATTGAAGGTGATCAAAGGTTGCTAGTGTACGAGTTCATGCCCCGGGGTAGCCTAGAAAATCACTTGTTTAGGAGATCCCTGCCTCTTCCATGGTCCATTAGAATGAAAATTGCCCTAGGAGCTGCAAAGGGTCTTGCTTTTCTTCATGAAGAAGCCGATCGACCAGTAATATATAGGGATTTTAAAACTTCAAATATACTATTAGATGCAGAGTACAACTCCAAGCTCTCAGACTTCGGTCTTGCCAAAGATGGCCCAGAAGGTGATAAAACCCATGTCTCTACTCGAGTGATGGGAACCTATGGCTATGCAGCTCCAGAATATGTCATGACAGGTCATCTTACTTCAAAAAGTGATGTGTACAGTTTCGGAGTGGTGCTACTTGAGATGTTGACTGGCAGAAGATCCATGGACAAACACAGACCCAATGGTGAGCATAACCTTGTGGAATGGGCTCGGCCACATCTAGGAGAGAGGAGAAGGTTCTACAAGTTGATAGACCCTCGTTTGGAAGGCCACTTTTCGGTGAAAGGTGCTCAGAAAGCTGCCCAACTTGCTGCTCACTGCCTTTGTAGAGATCCAAAAGCCAGGCCTCTGATGAGTGAAGTTGTAGAAGCTTTAAAGCCTTTGCCAAACCTCAAGGACATGGCAAGCTCTTCATATTATTACCAGACAATGCAAGCTGACCGCATTGGAGCGAGCCCGAACACACGAAACGGGCGAACACAAGGAGCATTGCTCTCCCGCAATGGGCACCAGCAAAGGAGTCTTTCTATACCAAATGGTACCTATGCATCTCCGTATCATCATCGGTTTCCTCAACCATCACCAAAACCCAATGGCAAAGCGTAG 1494 0.4632 MLITEFSQELVEMGLGAENGKVVEPWDVCKSKGRKKKKGDEEVEGAGSGCWLRLRFIGSCISSRSKVDTSVSGSGTSTHYAESKSTNDTSRDQPTAPAVSSTTTSIAESNSSTSKLEEELKIASRLRKFPFNDLKLATRNFRPESFLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLVGYCIEGDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEADRPVIYRDFKTSNILLDAEYNSKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKHRPNGEHNLVEWARPHLGERRRFYKLIDPRLEGHFSVKGAQKAAQLAAHCLCRDPKARPLMSEVVEALKPLPNLKDMASSSYYYQTMQADRIGASPNTRNGRTQGALLSRNGHQQRSLSIPNGTYASPYHHRFPQPSPKPNGKA 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01695 497 FunFam Serine/threonine-protein kinase BIK1 108 226 - -
Phco4g01695 497 ProSitePatterns Protein kinases ATP-binding region signature. 147 179 IPR017441 GO:0005524
Phco4g01695 497 MobiDBLite consensus disorder prediction 66 112 - -
Phco4g01695 497 CDD STKc_IRAK 147 424 - -
Phco4g01695 497 Gene3D Transferase(Phosphotransferase) domain 1 227 443 - -
Phco4g01695 497 SUPERFAMILY Protein kinase-like (PK-like) 119 421 IPR011009 -
Phco4g01695 497 ProSiteProfiles Protein kinase domain profile. 141 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01695 497 Pfam Protein tyrosine and serine/threonine kinase 146 421 IPR001245 GO:0004672|GO:0006468
Phco4g01695 497 Gene3D Phosphorylase Kinase; domain 1 100 226 - -
Phco4g01695 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Phco4g01695 497 PANTHER OS01G0588500 PROTEIN-RELATED 101 424 - -
Phco4g01695 497 FunFam Probable serine/threonine-protein kinase PBL8 227 442 - -
Phco4g01695 497 MobiDBLite consensus disorder prediction 446 477 - -
Phco4g01695 497 MobiDBLite consensus disorder prediction 446 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01695 Phco-Chr4 17777973 17782189 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phco4g01695 PK_Tyr_Ser-Thr 1.2e-45 CL0016