Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01687 ATGTGCCATCATTATTGCATGCAGGATCAAAAGCCCGAATCTGCTAAGAAGAAAATGGAAGAGCCTAGAGAAGAAAACAAGATGTTGAAGTTCTTGGACATCCTTGAACAAAACAAACCTGAAGATGCTACAAATGCTAAAGGTGTAACTAGCCATGAGGAAAGTGAAGAGAGTGAACTTGTGTCACTCTCTCTTGGGATATCATTCAAAGGAAAGATTAAGGATGAGAGGAAGCATTACAAGAGAGAAGATGAGGGTATGGATAAACGACTCACACTTGGGTTAGATATCAATTTGGATCCTGTAGATCATGTTGAAGCTGCAAATATTTCCAGCACTGCAAGTAGCTTACGTGGAGGGAAGGAAGAGGGACCAAGTGAGATGTGGCCACCGAGTAAATTTTTGAAGACAATGAAAAATGTGGATAAAAGTGAAGCTTCTCAAAATGATCAGCCCAAGAAGACTAGGGTTTCCATTAGAGCCAGATGTGATACACAAACGATGAATGATGGGTGCCAATGGAGAAAATATGGACAGAAAATGGCAAAAGGAAATCCATGTCCCCGAGCTTACTATCGATGCACTGTTTCTCCATTGTGTCCTGTAAGAAAACAGGTGCAAAGATGTGCTGAAGACATGACCATATTGATCACAACCTATGAAGGAACCCACAATCATCCACTTCCTATGTCAGCCACTGCAATGGCCTGCACAACTTCTGCTGCAGCTTCCATGCTCCAATGTCCCTCACTGAGTTCAGAGCATGGACATGAACTAGTCAATTCAGCTATATCCTCCATTACCAAATTTAGTGCTCCTAATTACAACCCTGATAATGCTCTAAACTTCTCCACATACCAAATTTCAAGACCACATCAATTCTACTTTCCAAACTCATCTATTTCAAGCTTGAATTCTCACCCCACAATCACTTTGGACCTTACAGCACCCCCAACATCCTCAAACTCAAGCTTCACTCACATGCCAAAATACTCATCAACAAACCTTAATTTTTCCTCAGATTTCTCTCCTCTACAATCTAGCATGCCTCCATCACCTTGGAGCAGTTACAGTTTCGACTCAAGAGCACTAACTCATAATAGAAACCATGGTGGTTACTTGTCAAACACTGGAATTCAAAATCAGCCATATCTTGAGCATCTTCATCAACCTATTTGCACGACCAACAATAACTTTCCTCAACGGTTTTTGCCGGATTCCATTATTGCTGCAACCAAGGCAATCACAAGCAATCCAAAATTTCAATCAGTGTTAGCAACTGCCCTCACAACATATGTTGGCAGTGAAGCCTGTGGTGGTAGGTTAAGAGAAAACCATGTTCTTGAGAATGCAGAACTGAACTTGAAGCTATGTAGTGAAAATAGCATAGGATGTGCATCATCAAGGTACTTGAGTATGTCTTCTTCTGCTCTTAACACTCAACAAGGAAACTCAAGTATATTTCCACTACCATTACCTGAGCAATGGAAGTGA 1494 0.4116 MCHHYCMQDQKPESAKKKMEEPREENKMLKFLDILEQNKPEDATNAKGVTSHEESEESELVSLSLGISFKGKIKDERKHYKREDEGMDKRLTLGLDINLDPVDHVEAANISSTASSLRGGKEEGPSEMWPPSKFLKTMKNVDKSEASQNDQPKKTRVSIRARCDTQTMNDGCQWRKYGQKMAKGNPCPRAYYRCTVSPLCPVRKQVQRCAEDMTILITTYEGTHNHPLPMSATAMACTTSAAASMLQCPSLSSEHGHELVNSAISSITKFSAPNYNPDNALNFSTYQISRPHQFYFPNSSISSLNSHPTITLDLTAPPTSSNSSFTHMPKYSSTNLNFSSDFSPLQSSMPPSPWSSYSFDSRALTHNRNHGGYLSNTGIQNQPYLEHLHQPICTTNNNFPQRFLPDSIIAATKAITSNPKFQSVLATALTTYVGSEACGGRLRENHVLENAELNLKLCSENSIGCASSRYLSMSSSALNTQQGNSSIFPLPLPEQWK 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01687 497 MobiDBLite consensus disorder prediction 1 37 - -
Phco4g01687 497 FunFam probable WRKY transcription factor 31 153 230 - -
Phco4g01687 497 Pfam WRKY DNA -binding domain 169 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g01687 497 Gene3D WRKY domain 153 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco4g01687 497 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 12 443 IPR044810 GO:0003700
Phco4g01687 497 SMART WRKY_cls 168 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g01687 497 SUPERFAMILY WRKY DNA-binding domain 161 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco4g01687 497 ProSiteProfiles WRKY domain profile. 163 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g01687 497 MobiDBLite consensus disorder prediction 1 57 - -
Phco4g01687 497 MobiDBLite consensus disorder prediction 111 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01687 Phco-Chr4 17637426 17639563 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco4g01687 WRKY 8.4e-24 CL0274