Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01682 ATGAGGAATGTCTTGGTTTCTTTGTATTACTTGTTTCCTGTAATCATTACTATGATCCTTGTGCTGCTTACTCCTATTCCCAGTGCACAATTAACGCCAAGTGAGAACAGAATTCTTCTCCACGTTCAGAAGCTTCTTGAATATCCTCAAGTTCTTCAAGAATGGAACAACTTCACCTACTTCTGCTCCCTCCCTCCCTTACCTTCTCTCAACATCGTCTGCTCCAATGGCCATACTCTCTCGAAAAGATTCTCCATTGAGTCTTTCTGCACTGTCTTGACAAAGCTCTCAAATCTGAAGGTGTTGTCATTGGTGTCACTTGGTTTGTGGGGTCCTTTACCTTCCAAGATTAACAGGTTCTGGTTTCTTGAAGTGCTGAACATAAGCTCAAACTTCATCTATGGGGAAATCACACCATCGATCTCCTCTTTGAAAAATTTAAGGAGTCTTGTTTTGGCTGATAATCTTTTCAATGGGAGTGCTCCTGATCTTGAAAGACTGGATTCTCTCGAAGAGCTCAAGTTGGGTGGCAACAAACTGGGTCCTGAATTTCCTTTATTGAGCAAGAATCTCGTGAGGGTTATCTTGAGCAACAACTCTTTGAGATGTAGAATCCCTCCCCAACTCATGCATGTTTATAAACTTCAGCTACTAGACATCTCTTCCAATGCAATATTTGGAAATGTCCCATCATATATTTTCTCTATTCCTTTCCTCAAGTACCTAAACTTGTCTGCCAACCAATTCAGTGGTTCCCTTTCTGTGAATGTGTCATGCAGTTCTGCTCTAACATTAGTTGATATCTCACACAACCTCTTGGTGGGAACATTGCCATCATGTATTGGTTCGAAGGCTTTAAACCGAACAACACGTTGTTCTGGGAATTGTTTGTCAAACAGGAGCTTAAATGATCAATATCCATCTTCTTACTTCCAGAAAGTGGAGGCCTTAGCTGTTAAACCTTCACCTAAATGGCAGAAGAGGAAATCAGAGATGCAATTAGACGTAAAACTTGGAATTGTTTATGTGGGAATTGCAGGGCTTCTTCTGGTTCTTTTGATTCTGTGTATATTCAGAAAGTTCAAAGCAGAAAAAGCAGATGTTAATTATAAAATAGATACCTCTGCTGCTGATGTCCGTGCATATCAAAGATCAAATATTAATGCAAGACATGTTCCTCCAGCTATGAGGCAACCTTTTCTTGGATTCCCACCATACTACATTTTTTCATCAGAAGAAATTGAAGATGCTACAAATAACTTTGACCCATCAAATCTAATAGCAGATGGATCAGAAGGACAGCTATATAATGGTTGGCTCATAAATGGTTCAATGGTTATGGTGAATCGTGTAAAACTAAAGCAGAAGTGTTTGCACAAAAACAGTATTGAGTGCTTGAAGGTATTACCCTATTTAAGGCACGGGCATTTGGTGAGTATTTTAGGACACTGTGTCACTACTCAACAAGATCGTCCCCAAATGATAAGCACAATCTTCATTGTATTTGAACATGTCTCAAACGTGTCATTGAGGGATTACCTTGCAGATGGGACAAAAAGAGAAATGTTGAAATGGCCACAAAGAATGGCAATCAGCATAGGCATTGCAAGTGGAATCCAGTTCTTACACACCAGAGTTCGTCCTGGCATATTTGGCAACAATATAAAGATTGTGAATATTCTTTTGGATGATACCCTCAATGCAAAAGTTAGTGGATACAGCATTCCATGGCCATCCAAGAAAACTCTTCACAGAAAAAAACTTTGTGACCAACAAATGGGCAGCACCAGCAAGAAGGCAGAAAAGGAAGATATATATCAATTTGGTGTTATTCTACTTGAAGTTATCACTGGCAAACTAATTACATCTTCCAGGAAAGTAGAGGAGCTGAAGGATGAGCTGCAGAAAGGCTTATTAGAAGCTGCATCACCATCACTAAGAGGTGCATCACCAATACTATGGGGTGTGGCCGATTTTTTAATCCGGGAAACTTGTGTGTATGAATCATTGAGGACTGCAGTTCAGATTGCCGCCAATTGTCTCAGCAAGGATCCCAGTAATCGCCCTTCAATAGAGGATATTCTCTGGAATTTGCAGTACTCCATGCAAGTTCAAGAGCCAAGGATCAGTGGTGTAAACCTCTTTACAAAAGTGTAA 2157 0.401 MRNVLVSLYYLFPVIITMILVLLTPIPSAQLTPSENRILLHVQKLLEYPQVLQEWNNFTYFCSLPPLPSLNIVCSNGHTLSKRFSIESFCTVLTKLSNLKVLSLVSLGLWGPLPSKINRFWFLEVLNISSNFIYGEITPSISSLKNLRSLVLADNLFNGSAPDLERLDSLEELKLGGNKLGPEFPLLSKNLVRVILSNNSLRCRIPPQLMHVYKLQLLDISSNAIFGNVPSYIFSIPFLKYLNLSANQFSGSLSVNVSCSSALTLVDISHNLLVGTLPSCIGSKALNRTTRCSGNCLSNRSLNDQYPSSYFQKVEALAVKPSPKWQKRKSEMQLDVKLGIVYVGIAGLLLVLLILCIFRKFKAEKADVNYKIDTSAADVRAYQRSNINARHVPPAMRQPFLGFPPYYIFSSEEIEDATNNFDPSNLIADGSEGQLYNGWLINGSMVMVNRVKLKQKCLHKNSIECLKVLPYLRHGHLVSILGHCVTTQQDRPQMISTIFIVFEHVSNVSLRDYLADGTKREMLKWPQRMAISIGIASGIQFLHTRVRPGIFGNNIKIVNILLDDTLNAKVSGYSIPWPSKKTLHRKKLCDQQMGSTSKKAEKEDIYQFGVILLEVITGKLITSSRKVEELKDELQKGLLEAASPSLRGASPILWGVADFLIRETCVYESLRTAVQIAANCLSKDPSNRPSIEDILWNLQYSMQVQEPRISGVNLFTKV 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01682 718 SUPERFAMILY L domain-like 66 299 - -
Phco4g01682 718 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 333 708 - -
Phco4g01682 718 Gene3D Transferase(Phosphotransferase) domain 1 505 711 - -
Phco4g01682 718 Gene3D Phosphorylase Kinase; domain 1 394 492 - -
Phco4g01682 718 SUPERFAMILY Protein kinase-like (PK-like) 399 698 IPR011009 -
Phco4g01682 718 ProSiteProfiles Protein kinase domain profile. 421 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01682 718 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 505 713 - -
Phco4g01682 718 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 32 189 - -
Phco4g01682 718 Pfam Protein tyrosine and serine/threonine kinase 427 636 IPR001245 GO:0004672|GO:0006468
Phco4g01682 718 Gene3D Ribonuclease Inhibitor 32 324 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01682 Phco-Chr4 17587730 17591000 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Phco4g01682 PK_Tyr_Ser-Thr 6.6e-13 CL0016