Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01675 ATGCAGGAAGATATGAAGAAGCAGCAGAAGCAGAAGCAGCTGGTCAATGAAGAATCTAAGAAGAAGGAGCGTCACATTGTGACGTGGACTCAAGAGGAGGATGATATACTCAGGGAGCAGATTGGCATCCATGGAACTGAAAACTGGGCAATCATTGCTTCTAAATTCAAGGATAAAACGACAAGACAGTGCAGAAGAAGATGGTACACTTATTTGAATTCTGACTTCAAGAAAGGAGGATGGTCACCAGAGGAAGACATGCTTTTATGTGAGGCTCAAAAAATATTTGGGAACAGGTGGACAGAAATAGCAAAGGTGGTTTCAGGCAGAACGGATAATGCTGTGAAAAACCGTTTCTCCACACTGTGCAAAAAGAGAGCAAAATATGAAGCCTTAGCAAAAGAGAACAACACTTCATACATCAATTCTAATAACAAAAGGACTTTTCTCCAGCACAGGTGTGATACAGATGTTGCATCAGAATCTGCAGCAGCTATTAAGAAGATGAGGAGGTCACATATCCCTGATGCTGAAGAAAAGATCAACTTTGGAGACAGAGCACATAAACAAAAGGGGATTCCAATAAATCAACAGTCAAGACCACCATTTGCAGTTTTAGCTCAAAACTCTGGCAATGTCAACTTGCCAGACCAGGATCATGTCTGCAATTTGAAGTTTAGTGATTATGCCCAAAACAAGATTCAAGGAACATTCCTTAAAAAGGATGACCCAAAGATAAATGCGTTGATGCAACAAGCAGAGTTATTAAGCTCACTAGCGCTAAAAGTTGATGCAGAGAACGTGGATCAAAGTCTTGAAAATGCATGGAAGGTTCTTCAAGAGTTTCTTAACAGAACCAAAGAATCAGACATCCCCAGATACAAAATTCCAGATTTACAACTTGTAGATCTTAAAGATTTGTTGGAGGACTTGAAGAGCAGTAGTGAGGAAGTCCAGCCATGCTGGAGGCAAATGGAACTATATGAAGACTCTCCAGGCAGTTCTGAATACAGTACAGGATCAACTCTACTGCCTCATTCAGCTGGTGAGAATTTGGAACACTCACTACATCAGGATATTGGAACTGAACTGAATATACAAATGGGAGATCCAGAAGAAGTTAGGGGATGTGACCAAGGGGTTCTTTCTAGAGCAACTCTAGATCAAGATTTATTCCCATCTTCTGAGGAACAGATAAACAATGATGGCATTGTTTCTGCCTTGTCATGTTCGGAGGAGTTCAGTTCACCTCTTCAAGTTACACCTCTGTTTAGATCCTTAACTGCCGGAATTCCTAGCCCTCAATTTTCAGAAAGTGAAAGGAACTTCCTTATGAAAACACTTGGAATGGAATCTCCATCGATCAAACCAAGTGTCAACCCATCACAACCGCCTCTCTGCAAAAGAGTCCTCCTAATCTGA 1422 0.4114 MQEDMKKQQKQKQLVNEESKKKERHIVTWTQEEDDILREQIGIHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKYEALAKENNTSYINSNNKRTFLQHRCDTDVASESAAAIKKMRRSHIPDAEEKINFGDRAHKQKGIPINQQSRPPFAVLAQNSGNVNLPDQDHVCNLKFSDYAQNKIQGTFLKKDDPKINALMQQAELLSSLALKVDAENVDQSLENAWKVLQEFLNRTKESDIPRYKIPDLQLVDLKDLLEDLKSSSEEVQPCWRQMELYEDSPGSSEYSTGSTLLPHSAGENLEHSLHQDIGTELNIQMGDPEEVRGCDQGVLSRATLDQDLFPSSEEQINNDGIVSALSCSEEFSSPLQVTPLFRSLTAGIPSPQFSESERNFLMKTLGMESPSIKPSVNPSQPPLCKRVLLI 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01675 473 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 76 IPR017930 -
Phco4g01675 473 Coils Coil 5 25 - -
Phco4g01675 473 SMART sant 25 74 IPR001005 -
Phco4g01675 473 SMART sant 77 125 IPR001005 -
Phco4g01675 473 CDD SANT 81 122 IPR001005 -
Phco4g01675 473 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Phco4g01675 473 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 127 IPR017930 -
Phco4g01675 473 PANTHER MYB PROTEIN-RELATED 28 163 - -
Phco4g01675 473 Pfam Myb-like DNA-binding domain 29 89 - -
Phco4g01675 473 Gene3D - 80 155 - -
Phco4g01675 473 CDD SANT 28 72 IPR001005 -
Phco4g01675 473 Gene3D - 15 77 - -
Phco4g01675 473 ProSiteProfiles Myb-like domain profile. 29 72 IPR001005 -
Phco4g01675 473 FunFam Transcription factor MYB124 21 77 - -
Phco4g01675 473 SUPERFAMILY Homeodomain-like 25 119 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01675 Phco-Chr4 17372678 17377666 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phco4g01675 Myb_DNA-bind_6 8.2e-15 CL0123