Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01635 ATGGACCTCACCAACAACGCCAATACTACTCACACAAATCCTCAAACCCCCCAACACCCCACCACCAAGCGCCACCGCCCCACCACCGCTCCTCCGCCCTCACAACCACCGTCCGCTTTCGTTTCCTACAAGGAGTGCCTCAAAAACCACGCTGCCAGCATAGGTGGCCACGCGCTTGATGGATGCGGTGAATTCATGCCCTCCTCTTCCTCCAATCCCACAGAACCACGCTCGCTAACGTGCGCCGCCTGTGGATGCCACCGTAACTTCCACCACCGTGACACACAACAGTATCACTCCAACCCCAGGCCAAATTTCATAAGCTTCTACCCCTCACCGCCGCCACCCCATCATGGCCCGGGCCTCTGCACTAGCCCAAGCCCAAGCCCGTTGTCAAGCCCCAGCCCGCCGCCTCTCTCCCACCATTTCCCAGGTCGCAGACCAGTCCTGGGGCTCTTTGGCCCGGGAAACGAGCATCGCCACACGAGTTTCCATCTTTCCGAGAGCCCGAGTGGACAGAAGAGGTTCAGGACCAAGTTCAGCCAAGAGCAGAAGGAGAAGATGCAGAATTTCTCTGAGAAATTGGGTTGGAGAATGCAGAAAGGGGATGAAGGGTTGGTGCAGGATTTCTGCAATGAGATTGGCGTTTCGAGAGGGGTCTTCAAGGTCTGGATGCACAACAATAAGAACACTTGCAGGAAGAGATCGTTGGAGCCTGATGAAAAGACCAATGGCAATGGTTCTGATAGTCTTAATAACAATCCTTACAGCACCAACGATGACACTCAAAACTGA 795 0.5497 MDLTNNANTTHTNPQTPQHPTTKRHRPTTAPPPSQPPSAFVSYKECLKNHAASIGGHALDGCGEFMPSSSSNPTEPRSLTCAACGCHRNFHHRDTQQYHSNPRPNFISFYPSPPPPHHGPGLCTSPSPSPLSSPSPPPLSHHFPGRRPVLGLFGPGNEHRHTSFHLSESPSGQKRFRTKFSQEQKEKMQNFSEKLGWRMQKGDEGLVQDFCNEIGVSRGVFKVWMHNNKNTCRKRSLEPDEKTNGNGSDSLNNNPYSTNDDTQN 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01635 264 Pfam ZF-HD protein dimerisation region 41 95 IPR006456 -
Phco4g01635 264 SUPERFAMILY Homeodomain-like 163 234 IPR009057 -
Phco4g01635 264 FunFam Zinc-finger homeodomain protein 2 160 234 - -
Phco4g01635 264 NCBIfam homeobox domain, ZF-HD class 173 230 IPR006455 -
Phco4g01635 264 MobiDBLite consensus disorder prediction 95 144 - -
Phco4g01635 264 MobiDBLite consensus disorder prediction 234 264 - -
Phco4g01635 264 MobiDBLite consensus disorder prediction 107 143 - -
Phco4g01635 264 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 13 231 - -
Phco4g01635 264 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 43 94 IPR006456 -
Phco4g01635 264 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 43 94 IPR006456 -
Phco4g01635 264 MobiDBLite consensus disorder prediction 243 264 - -
Phco4g01635 264 MobiDBLite consensus disorder prediction 1 25 - -
Phco4g01635 264 Gene3D - 160 234 - -
Phco4g01635 264 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01635 Phco-Chr4 16144622 16145416 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Phco4g01635 ZF-HD_dimer 6.5e-28 No_clan