Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01631 ATGCTGAATCCTTCAACACAAAACACCTTCTGTGGTATATTTGTACCAAACTCTCTACAAAAGTTTGTTGGCCAATTGCTACATACAAAAAAAAATTCATCATTCCCTACCTGGAAAGCTATATGGTTGTATTGGGATTCATTCACTCCCGAAAGCTTCACAAAATTGAAGGCCATGTTGAATGTTGACGTGATTGGGAACAATAAAAGGAAGAGGTGTGGGAGGATTTTCAGGTTCAAGAACTTTGCTGAACCTGGATACCCTGTTATGTTTGGTGGGCCATTTCGTGAGAATGTGAATGCATTGCTTGAATATGCAAATTTGGAGAGTCATTTAAGCATGCCAATGTGGTCTTTTGAACTTGAAGTTCATCACCAACCACCTTTGCATATCTTCTTGTTTGTGATTGAAGAGCCAATAGAAGCAGTGCTCAATCGTCATTGCAAGCATTGTCAATACGTTGGCTGGGGAAACCATTTGATTTGCAATAAGAAGTATCACTTTGTGTTACCCTCAAAGGAGACACTTGGTAGCTGCAGGAACTGTGAAGGGTGCTGTGATGCAATTGCTACAATTAACAATGGTAAGTCAAAATTAACTGAATTACAGGGTCATATGATGCATGGTGTTTTTCACTCTAATGGATTCGGCCATTTGCTATGTGTCAATGGATTGGAAATGGGTTCTAATTTGGCTGGAAACCAGATCATGGACTTTTGGAACCGTTTGTGCAAGGCATTGCAAGCAAGGAAGGTGAGTTTAAATGATGTTTCAGAAAAGAGGGGAATGGAACTGAGACTTGTAAATGGAATAGCATATAGTGAATCATGGTTTAGTCGTTGGGGTTACAAATTTGGTCGAGGAAGCTTTGGTGTAACTCAATCCATGTACCTGAAGGCCATACAAGCAATAAGAAGCATGCCATTGTACTTGATCACACACCATATCACCAACTCCAACCATGCCATTCCACTCATCTTCTCAAGGTATCAAACACTTTCAGATCAATCCCTTCTTACCCTTGGTGACCTTTTTTGTTTCATGTTAGACCTCAAATCACGTCTTCCCCCAGATATTTCCATTGCTTCTTATACCACAAGTGCCTTGGTTGAGACCAATTGTCGTTGGTCCCCTAAAAGGATTGAGATGGCAACAAGGGTCATTGTTGAGGCCTTGAAAAAGACTGAGTTTAGATGGGTTTCAAGGCAAGAAGTTCGAGATGCTGCTCGTGCATACATTGGAGACACAGGTTTGCTAGATTTTGTGTTGAAGTCATTAGGAAACCATGTTGTAGGAAACTACTTGGTTCGTAGAAGCTTGAACCCTGTCACCAAAGTCTTGGAATATTGCTTGGAAGACATTTCTAAAGTTTACACTTGTAATCAAAGTTTGGTAATGAGTAACAAAGTGAAGGAGAAATACAAGATCACACGAACTCAACTAATCAAAGACATGCTTTATCTGTACAAGTACATTCTCGTAGACCCTAAACCAATTATGGGATCAGAATTTCTCTCAGCTATACCATTAGCAGCTAGGATAATTCTTGACACTAAGTATTTTATAAAAGATTACTTTGGAGATTTTTCTTACCAAGTTGATCTAGGTTCACAAGATAAACTCAACCTTTATTGTACAATTTTGATGAGGAATGATGGTAATGGTGATGAGTACCTGAACGAGGCCTTTATGCCACCCCATGAATGCATCACACTCAAAACAACTGCTACTATCAATGACTTAAAGCTAGAGGTTGAAAGAAGCTTTAGAGAAATGTATTGGGGGTTAAGAAGTTTCGTTGTGGAATCAATTCAGAATTTGAGTGTGAATAATGGGACAGATATGGTTTTTGGACTAACCAAAGTGGGTGAAAAAATTGTAGTTGAAGGTCGTCACACCAACATGATTGAGCAAATATGTGAACGTGATCCAAATAGTGGTATAGTGGATTGTAGTTGTGGAACCATAGAAGATGATGGTGAAAGGATGGTCTCATGTGATATTTGTGAAATTTTGCAACACACTAGATGTGTTCGAATTCCAAATGACCAAGACATTCCTCATATTTTTCTATGCAAAAAATGTGAACAAGAAATTGTTTTCTTTCCTTCTTTGCCATAA 2121 0.388 MLNPSTQNTFCGIFVPNSLQKFVGQLLHTKKNSSFPTWKAIWLYWDSFTPESFTKLKAMLNVDVIGNNKRKRCGRIFRFKNFAEPGYPVMFGGPFRENVNALLEYANLESHLSMPMWSFELEVHHQPPLHIFLFVIEEPIEAVLNRHCKHCQYVGWGNHLICNKKYHFVLPSKETLGSCRNCEGCCDAIATINNGKSKLTELQGHMMHGVFHSNGFGHLLCVNGLEMGSNLAGNQIMDFWNRLCKALQARKVSLNDVSEKRGMELRLVNGIAYSESWFSRWGYKFGRGSFGVTQSMYLKAIQAIRSMPLYLITHHITNSNHAIPLIFSRYQTLSDQSLLTLGDLFCFMLDLKSRLPPDISIASYTTSALVETNCRWSPKRIEMATRVIVEALKKTEFRWVSRQEVRDAARAYIGDTGLLDFVLKSLGNHVVGNYLVRRSLNPVTKVLEYCLEDISKVYTCNQSLVMSNKVKEKYKITRTQLIKDMLYLYKYILVDPKPIMGSEFLSAIPLAARIILDTKYFIKDYFGDFSYQVDLGSQDKLNLYCTILMRNDGNGDEYLNEAFMPPHECITLKTTATINDLKLEVERSFREMYWGLRSFVVESIQNLSVNNGTDMVFGLTKVGEKIVVEGRHTNMIEQICERDPNSGIVDCSCGTIEDDGERMVSCDICEILQHTRCVRIPNDQDIPHIFLCKKCEQEIVFFPSLP 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01631 706 CDD PHD_MMD1_like 650 695 - -
Phco4g01631 706 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 636 699 IPR013083 -
Phco4g01631 706 SMART PHD_3 650 696 IPR001965 -
Phco4g01631 706 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 70 699 - -
Phco4g01631 706 Pfam PHD-finger 651 697 IPR019787 -
Phco4g01631 706 ProSitePatterns Zinc finger PHD-type signature. 651 695 IPR019786 -
Phco4g01631 706 SUPERFAMILY FYVE/PHD zinc finger 643 699 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01631 Phco-Chr4 16068461 16073964 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Phco4g01631 PHD 5.4e-07 CL0390