Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01614 ATGGCGATACTCCAACTCTTTCCAACAAACTCCCAGTTTTCTTGCCACCTCAAACCTCCGGCAACTTCGGACCGCGGCTTCGTATTCCACGAAAAGGTGCGCTACCTTAAAGCCCTCAAAGTGAAGCCGGAGAAGGCCTTCCACTTAAACCCCACACTCCGCTCCTCCCCTCTCGCCGTCCTCGAATCCGTCGCCCGCTGCCTCTACTCCCTCGGAGTTCCACGCGCCGCCATGGGTCGCATCCTCGACATGCACCCTGTGCTCCTTACGTGCGACCCCTACTCCCAACTCTATCCCCTCCTCGACTTCCTCCTCCATGAGGTCCGAATCCCCTTCCCCGATGTCCACCTCTGCATCCTCCGCTGCCCCAGATTACTCGTTTCCAGCGTCGATAACCAATTGCGTCCCACACTGCTATTTCTCAGGGGATTAGGTTTCTGTGGGCCCCACTCCCTCACGTGCCAGACTACCCTGCTCCTCGTATCAAGCTTGGAGGACACCATTTTGCCCAAGATGGAGTTTTTGAAGAGTTTGGGGTTCACCCACATCGAGGTTTGCAACATGGTCGTCAGGTCCCCTGGGTTGTTGACTTTAAGCGTGAAGAAGAATTTGGTGCCCAAGGTGGATTTTTTCTTGAAGGAGATGAATGGGGATGTTGCTGAGCTCAAGAGGTTTCCTCAGTATTTTTCTTTTAGCTTGGAACGGAGGATTAAGCCGAGATTCGGGAGGCTGAGGCAGCTTGGCGTGTCGATGCCGTTGGAAGATATGTTGAAGGTTAGTGATGGCGGGTTTAATGCTAGGTTGCTTGAATTGAGGTTTAAGACTCTTGAGTTTGGAGTAGGACAATACTTGTAG 855 0.5298 MAILQLFPTNSQFSCHLKPPATSDRGFVFHEKVRYLKALKVKPEKAFHLNPTLRSSPLAVLESVARCLYSLGVPRAAMGRILDMHPVLLTCDPYSQLYPLLDFLLHEVRIPFPDVHLCILRCPRLLVSSVDNQLRPTLLFLRGLGFCGPHSLTCQTTLLLVSSLEDTILPKMEFLKSLGFTHIEVCNMVVRSPGLLTLSVKKNLVPKVDFFLKEMNGDVAELKRFPQYFSFSLERRIKPRFGRLRQLGVSMPLEDMLKVSDGGFNARLLELRFKTLEFGVGQYL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01614 284 Pfam mTERF 51 264 IPR003690 GO:0003690|GO:0006355
Phco4g01614 284 Gene3D Transcription termination factor 3, mitochondrial 29 277 IPR038538 -
Phco4g01614 284 PANTHER CGI-12 PROTEIN-RELATED 179 269 IPR003690 GO:0003690|GO:0006355
Phco4g01614 284 SMART mt_12 150 181 IPR003690 GO:0003690|GO:0006355
Phco4g01614 284 SMART mt_12 186 218 IPR003690 GO:0003690|GO:0006355
Phco4g01614 284 SMART mt_12 116 147 IPR003690 GO:0003690|GO:0006355
Phco4g01614 284 SMART mt_12 219 250 IPR003690 GO:0003690|GO:0006355
Phco4g01614 284 SMART mt_12 79 111 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01614 Phco-Chr4 15690988 15691842 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phco4g01614 mTERF 2.2e-34 No_clan