Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01597 ATGATGTCTTATCAATCAATGGAGGAGAGAAAGTTTGTGTGCAAGTATTGCAGCAAGAGGTTCCCGTGTGGGAAGTCTCTTGGTGGCCACATCAGGACTCACATGATGAGTGAGAATTCAGCTTTAGGTAATGCAGAGAGGAACATTGCTACTAATGGTATGTTCAAGTTGAATGGCGGGGGAAAGAGGAAGAGGGATTTGGGGTCTGAAGAAAATGGTGGTGGTGCTAGTCGGGGGAACTATAACATCATTTATGGTCTTAGAGAGAACCCCAAGAAGACCACGAGGTTTGTGCATTCCAATTCCACTTTGCAGCTTGACAAGTTCTGCAAAGAATGTGGGAAGGGATTTTTTTCATTGAAGGCTCTTTGTGGCCACATGGCTTGTCACTCTGAAAAGGACAAGGGAGCCAACAGGTTTGAGAGCAGTTCTGGCGGGTTTTCTGAGAAGCAGAAATTGGTTATGGATAGTCAGTCTGACACTGAAACTTCTACGCCAAGGAGGTCCAAGAGAATGAGGTTCAAGACCGTTAGCAGTAGCAACAACCAAGCTCAATCTTCTGTTTCGGAGGTTGAGAAGGGTCAAGAAGAGGTGGCTAGGTGTTTGATGATGTTGTCCAAGGATTCTAGCTATAAGGGTCGTTTTGCTTTGTTCACAGAGTCTTCTGATAACAACTCGGTTGTTCTAGAGGCAAAGTCACCTTCTCCGGAAACCAAGGTTACTATGATGAATAGTAATGGTAAGAATTTTATGTCTAGTGCTTATGTGGAGAAGAAGTTGGAGCAGCCGAAGGACATGAAGTTTAAGTATGCTGAAGTTGGCTATGATTCTGATAATTCAGATTCTGGGTATTTTAGATATGGTCCTAAGGAGGTTGACTCCACTGATTCAAATAACGGGAATTTCAAGAATGAGGCCAAGTCTTCGAAAGCGGGGTACTTATCTGGGTTTGAGGATTATGATGTTGAGTCGAGGAAAGTGCTAAGCAGGGGAAGGAGCAGGAGCATTGAATTTAAGAAATTTGTTTTGGAGGATTCGGAGAATGATAGACAAGATGGTGGGGCTGCAAGGAAACTTGATTCAAAGAAATTTAAGAAATCCAACTATGATTCTCTTGGCCAAAATTTAGGTGGGGTTTCTAGCAGGAAGATTGGGAATGGTTTTGCAAATGATAAGGTGAACAAGTACGAGTGCTTAACCAGTGAAAGAGACAATGGTTATGATGATTCTGCTTATGAGAGTGAAGAAAACAGCACAGACACTGATTCTTATCCAGCTCCAAAGGCGTACCGCAACAGGAACCTCAGTGGCCAAAAGGGGAAGAAGAAATTGAAGTCAAAGAAAAGCAAGGCACATGAGTGCCCAATCTGCAACAAAATTTTCAAGTCAGGCCAAGCCTTGGGGGGTCATAAGAGATCCCATTTTATCGGAGGTTCTGAGGAGAACACCCTTGTGATAAGGCCAGGTGCTCCTGCTGTTCCTTGCCTCATTGATCTCAATCTACCAGCACCAGTTGATGAATAG 1524 0.437 MMSYQSMEERKFVCKYCSKRFPCGKSLGGHIRTHMMSENSALGNAERNIATNGMFKLNGGGKRKRDLGSEENGGGASRGNYNIIYGLRENPKKTTRFVHSNSTLQLDKFCKECGKGFFSLKALCGHMACHSEKDKGANRFESSSGGFSEKQKLVMDSQSDTETSTPRRSKRMRFKTVSSSNNQAQSSVSEVEKGQEEVARCLMMLSKDSSYKGRFALFTESSDNNSVVLEAKSPSPETKVTMMNSNGKNFMSSAYVEKKLEQPKDMKFKYAEVGYDSDNSDSGYFRYGPKEVDSTDSNNGNFKNEAKSSKAGYLSGFEDYDVESRKVLSRGRSRSIEFKKFVLEDSENDRQDGGAARKLDSKKFKKSNYDSLGQNLGGVSSRKIGNGFANDKVNKYECLTSERDNGYDDSAYESEENSTDTDSYPAPKAYRNRNLSGQKGKKKLKSKKSKAHECPICNKIFKSGQALGGHKRSHFIGGSEENTLVIRPGAPAVPCLIDLNLPAPVDE 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01597 507 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 7 507 - -
Phco4g01597 507 MobiDBLite consensus disorder prediction 175 192 - -
Phco4g01597 507 ProSiteProfiles Zinc finger C2H2 type domain profile. 452 474 IPR013087 -
Phco4g01597 507 ProSitePatterns Zinc finger C2H2 type domain signature. 454 474 IPR013087 -
Phco4g01597 507 ProSiteProfiles Zinc finger C2H2 type domain profile. 108 135 IPR013087 -
Phco4g01597 507 SMART c2h2final6 108 130 IPR013087 -
Phco4g01597 507 SMART c2h2final6 452 474 IPR013087 -
Phco4g01597 507 SMART c2h2final6 12 34 IPR013087 -
Phco4g01597 507 MobiDBLite consensus disorder prediction 406 448 - -
Phco4g01597 507 ProSitePatterns Zinc finger C2H2 type domain signature. 110 130 IPR013087 -
Phco4g01597 507 MobiDBLite consensus disorder prediction 135 192 - -
Phco4g01597 507 MobiDBLite consensus disorder prediction 141 162 - -
Phco4g01597 507 ProSiteProfiles Zinc finger C2H2 type domain profile. 12 39 IPR013087 -
Phco4g01597 507 Gene3D Classic Zinc Finger 2 134 - -
Phco4g01597 507 SUPERFAMILY beta-beta-alpha zinc fingers 109 474 IPR036236 -
Phco4g01597 507 Pfam C2H2-type zinc finger 451 474 - -
Phco4g01597 507 Pfam C2H2-type zinc finger 110 132 - -
Phco4g01597 507 Pfam C2H2-type zinc finger 12 35 - -
Phco4g01597 507 ProSitePatterns Zinc finger C2H2 type domain signature. 14 34 IPR013087 -
Phco4g01597 507 SUPERFAMILY beta-beta-alpha zinc fingers 8 36 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01597 Phco-Chr4 15231177 15232700 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco4g01597 zf-C2H2_6 1.3e-10 CL0361