Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01572 ATGCCTCCATTGTATATTGCTTTATCTTCCTTGGTACTCTTGCTGGTTTTGGTGGGAGCCTTTTCAATTATTTTGAAATGGAGGAAGAGTAGGAGACCATCGAGTGCTGTTGGCCCTGCATTCACATCATCTCTGAACAAGAGATCAGGTTGTCAAGCAGTATTACAAGCTCAACATCAGTGTCACTTATGTCCACAATGGCTACTTCCATTCTCTCTGTTAAAACATTTTCATGTTTATAGTGGAACATTGGAAGATGGGGCTGAAGTTGCAGTTAAGCTGCTAACAAGAGATAATCAGAATGGAGACCGAGAATTTATTGCAGTGGTTGAGATGCTAAGCCTTTTGCATCACCGAAATCTAGTGAAACTGATTGGTATATGCATTGAGGGGCGCAGGCGTTGCTTGGTGTATGAGCTTGTTCGCAATGGCAGTGTCGAGTCACATCTGCATGGTAGCATTTTCATCAGCTCATCAGCCCATGTACTAGTGTGTGTTGCCCCAGAATATGCAATGACAGGGCATTTACTCGTCAAAAGTGATGTTTATAGTTATGGTGTTGTGCTGCTTGAACTTCTCACAGGCAGAAAGCCAGTGGATATGTCTCAACCTCAGGGACAGGAGAATCTTGTAACATGGGCACGGCCAATGTTGACCAGTAGAGAAGGTCTAGAACAGCTGGTGGATCCATCTTTGGCTGGAAGTTACAACTTTGATGACATGGCAAAGGCTCTTAAGTTAATATACAAAGACACAGATGAGACATGTGGAGATTGTTGTAGTGAGAAGGATTCCTCTGATCAGGAGTCCGATTTTAGGGGTGACCTTGCCCCTTCTGATAGCAGTTGGTGGAATGCGGGAGGGTTAACCCCTCGATTAACTTATGTGCAAGCATCTTCCTTCATCACTATGGAATACAGTTCTGGTCCACTTGAAGAAATGGAAAACAAACCGTTTTCAACATCAAGCTTGATTGGAGATGAAATATCTTTAGCATTTAGGCATGGGAATAGATCAGGCCCCTTAAGAACAGTCCGAAGCAAGCTGTCCTTACATAGATTTACAGGAAGTCGGAGTGAGCATGGAGGACCTTCTTCCAAGCGTAATTGGAATGATGGTTACTGGGTTTAA 1131 0.4359 MPPLYIALSSLVLLLVLVGAFSIILKWRKSRRPSSAVGPAFTSSLNKRSGCQAVLQAQHQCHLCPQWLLPFSLLKHFHVYSGTLEDGAEVAVKLLTRDNQNGDREFIAVVEMLSLLHHRNLVKLIGICIEGRRRCLVYELVRNGSVESHLHGSIFISSSAHVLVCVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPQGQENLVTWARPMLTSREGLEQLVDPSLAGSYNFDDMAKALKLIYKDTDETCGDCCSEKDSSDQESDFRGDLAPSDSSWWNAGGLTPRLTYVQASSFITMEYSSGPLEEMENKPFSTSSLIGDEISLAFRHGNRSGPLRTVRSKLSLHRFTGSRSEHGGPSSKRNWNDGYWV 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01572 376 MobiDBLite consensus disorder prediction 355 376 - -
Phco4g01572 376 Gene3D Phosphorylase Kinase; domain 1 76 140 - -
Phco4g01572 376 SUPERFAMILY Protein kinase-like (PK-like) 78 218 IPR011009 -
Phco4g01572 376 Gene3D Transferase(Phosphotransferase) domain 1 141 267 - -
Phco4g01572 376 Pfam Protein tyrosine and serine/threonine kinase 166 205 IPR001245 GO:0004672|GO:0006468
Phco4g01572 376 Pfam Protein tyrosine and serine/threonine kinase 79 152 IPR001245 GO:0004672|GO:0006468
Phco4g01572 376 PANTHER OS01G0750732 PROTEIN 165 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01572 Phco-Chr4 14831505 14833935 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Phco4g01572 PK_Tyr_Ser-Thr 6.5e-11 CL0016