Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01532 ATGGACACAGACGGCATCGTTTCCTTCGATCATATATCGCCCGAGGATTCCCACGAGGTTCATGTTTTGGCCGTCGATGACAGCCTCGTTGATCGAAAGGTCATTGAACGCTTGCTCAAAATCTCAGCTTGTAAAGTTACAGCTGTGGATAGTGGAATCAGAGCACTGCAATTTCTGGGGTTGGGCGAGCAGAGAAGGACCTCTGAATCTGATGGTTTTGTCCCGAGTTTAAAGGTGGATCTAATTATCACAGACTACTGCATGCCGGAGATGACAGGTTATGAATTGCTCAAGAAAATAAAGGAATCGTCCATGTTCAGGGAAATTCCCGTAGTGATTATGTCGTCTGAAAACATTTTGCCTCGCATAGACAGATGCTTGGAGGAAGGTGCAGAGGATTTCATAGTGAAACCAGTGAAATTATCTGATGTGAAACGATTGAAGGGGTACATGACAACGAGAGAGGTTAAGGTTGGAAGCCATGACAGAGGAAGTGGTGTTGAGATTAACAACAAAAGAAAGCTGGAAGAAGAGGAAGAGACCTCTGACATGTCATCATCGCCGCCGTCCATTTCTACACTTTCATCGTCACCGTTCCTTTCATCACCATCATCTTCTCCAACATCTTCACCAACCGTGCTCGCTTCTCCAATCAGACGGCTTAAAACGAGCACCATCGATTGA 684 0.4561 MDTDGIVSFDHISPEDSHEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLGEQRRTSESDGFVPSLKVDLIITDYCMPEMTGYELLKKIKESSMFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYMTTREVKVGSHDRGSGVEINNKRKLEEEEETSDMSSSPPSISTLSSSPFLSSPSSSPTSSPTVLASPIRRLKTSTID 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01532 227 Gene3D - 20 195 - -
Phco4g01532 227 ProSiteProfiles Response regulatory domain profile. 21 152 IPR001789 GO:0000160
Phco4g01532 227 MobiDBLite consensus disorder prediction 158 227 - -
Phco4g01532 227 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 192 IPR045279 GO:0009736
Phco4g01532 227 Pfam Response regulator receiver domain 22 144 IPR001789 GO:0000160
Phco4g01532 227 SUPERFAMILY CheY-like 20 146 IPR011006 -
Phco4g01532 227 CDD REC_typeA_ARR 22 147 - -
Phco4g01532 227 MobiDBLite consensus disorder prediction 184 227 - -
Phco4g01532 227 SMART REC_2 20 151 IPR001789 GO:0000160
Phco4g01532 227 MobiDBLite consensus disorder prediction 158 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01532 Phco-Chr4 14285986 14287110 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco4g01532 Response_reg 1.2e-20 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01532 4 14285986 14287110 Phco4g01532 4 14285986 14287110 ECH