Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01517 ATGGAAAAGGATATCTGTGATCTTTCTCAAACATGGGATGGTGATAATGGCAACTCTACTGAGAAAAGGCTCAGGTTATTTGGCTTTGAGCTAAACCCTTCTAAAGAGGGCTGTCTCAAAGAGTCTGGTGAAGGAGATGAAAGCGTAAACTCCTCTAACTCAGTCTCATCAGGAGGAGACAAAACTGTGCAAGAAAAGACCTCAGCCAAAGACCCAGATGAGAAGAAGTTCGAGTGCCAATACTGTTTCAAAGAATTTGCAAACTCACAAGCATTAGGAGGTCACCAAAATGCTCACAAGAAAGAGAGAATGAAGAAGAAGAGGTTGCAGCTTCAATCTATAAACCGTTACCTCCAACACCCTTTTCAAACCAACCATGGCTTTGCTTACCAAGCCTCAGATAGTCCTTGGTTCTATGACCCCTCTACCTACAATTCTGAGTTCACCCTTTGTGAAGAACCTCAGATTAGCTTCAATTCAAATGTTTTAGATACCAATTTTTCTTGTGACCAGAAATCTAGTTGGTATTCTCTGGCATCACACCCACCTTCACAGCAAGATACCTGCATGTTTACTTTCTCCAATGCAAATAATAACACTCCTTTCATCTATAAACCTTGCCACTTCCCTTCAAACCAGAGTCATAGTAAAGCCCTAGATCTTCAACTAGGCCTCAACCTGGAGTCAAATACAAGAAGTTCTCTAAGGAGGATGTAA 717 0.4142 MEKDICDLSQTWDGDNGNSTEKRLRLFGFELNPSKEGCLKESGEGDESVNSSNSVSSGGDKTVQEKTSAKDPDEKKFECQYCFKEFANSQALGGHQNAHKKERMKKKRLQLQSINRYLQHPFQTNHGFAYQASDSPWFYDPSTYNSEFTLCEEPQISFNSNVLDTNFSCDQKSSWYSLASHPPSQQDTCMFTFSNANNNTPFIYKPCHFPSNQSHSKALDLQLGLNLESNTRSSLRRM 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01517 238 ProSitePatterns Zinc finger C2H2 type domain signature. 79 99 IPR013087 -
Phco4g01517 238 SUPERFAMILY beta-beta-alpha zinc fingers 73 104 IPR036236 -
Phco4g01517 238 PANTHER ZINC FINGER PROTEIN 5 18 228 IPR044299 GO:0010090
Phco4g01517 238 MobiDBLite consensus disorder prediction 45 63 - -
Phco4g01517 238 FunFam zinc finger protein 5 51 127 - -
Phco4g01517 238 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
Phco4g01517 238 Gene3D Classic Zinc Finger 51 128 - -
Phco4g01517 238 MobiDBLite consensus disorder prediction 34 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01517 Phco-Chr4 14018675 14019391 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco4g01517 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01517 4 14018675 14019391 Phco4g01517 4 14018675 14019391 ECH