Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01442 ATGGCTAACCAATCCTCGTCAAATGGGTCGTCTGTGTCGGATTCCATTAAGGCTTCGGCTCCGTTATCGTCCTCGTCGCTGCAGTCATCGGACGCAGAGTCTTCGCTACCCTCGAATCCGCCGCCGCCTTCACCGTCATCGCCGTTATCATCACCACCACCCCCGGAAAATTCTTCTCCTCCCCCGACAACAACTCCGCCGGTCCTGGAAAACTCCCCTCCGCCTCCAACTCCGTCTCTTTCTCCGCCGCCAACTCCGTCTACTTCTCCACCACCAACACCGTCTACTTCTCCACCACCAACACCGTCTACTTCTCCACCACCAACACCGTCTACTTCTCCACCACCTTCCCCTTCTCCGTCGCCACCAGCGCCAGTTCAATTTTCTCCCCCGCCAACACTTTCTCCGCCTCCTCCGTTAACTAACCCGCCATCACAAGGTTCAAATCCACCACCTTCTCTATCACCGCCGCCACCTTCACAACCATTACCATCGTCGCCACCTCCACAAAATTCACCTCCATCACCACAATCTTCCGCTCCTCCTCCACAGTCCCTTTCGCCTCCAACTGTAACTACAACCCCACCTTCACCGGCTTCTCTTATTACTCCGCCGGCGCTGCAGACAGCTTCAGCGTCAAAGCCCCCTTCACAACTGCGATCAACACCAGGATTAACTCCGACTTTCAAACCGAAACAAAAGTCTACTCCCCCGAAAAGCAACCCTCCGACGGCATCACCAAGCTCCTCCGGTAATAGTCATACAGGAGAAGTTGTTGGTCTTGCTCTCGCCGGGGTTTTCATCGTTGGCTTTCTTGCTCTAGTTATTTTCTTTATATTCAGGAATAAGAATAAGCGAGTGAACATCTATGCCGTGCCACCCCCCAGGAAATCTCATATGAGAGCAGCAGGAGCAGCAGGAGATGTACTTTATTATGTAGAGGAGCCTGGTCTTGGGAATGGAGCACAACAAGATGGCATGCATATAAAATCTCCTTCAGATCCGGCTCTGAGCGGTGGTCAGTTAGTTTTTAGCTACGAAAAGATTGCGGAGATCACTAACGGGTTTTCCAGCGAAAACATAATAGGGGAGGGGGGATTTGGGTATGTTTACAAGGCTTCCATGCCTGATGGTAGAGTGGGGGCGCTTAAGATTTTGAAGGCTGGTAGTGGCCAGGGAGAAAGGGAGTTCAGGTCTGAGGTTGACATCATCAGCAGAATCCATCATCGACATTTGGTTTCACTAATTGGTTATTGCATATCAGAACAGCAAAGAGTGCTTATCTATGAGTTCGTTCCTAATGGGAATCTCAATCAGCACTTGCATGGAAGTGAATTGCCAATTTTGGATTGGTCCAAGAGGATGAAGATAGCAATTGGTTCTGCAAGGGGCCTGTCATATCTTCATGATGGATGTAACCCAAAGATTATTCACAGAGATATTAAATCGGCAAACATTCTTTTGGATAATGCTTACGAGGCACAGGTTGCAGACTTTGGACTTGCAAGGCTAACCGACGATGCTAAAACCCATGTATCAACTAGGGTGATGGGGACCTTTGGGTACATGGCTCCAGAGTATGCAACAACTGGAAAATTAACGGATAAATCAGATATTTTCTCTTTTGGAGTTGTCCTCCTTGAGCTTATAACTGGAAGGAAACCTGTTGATCCGATGCAGCCCTTAGGACAGGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCCTTCGTGCAGTTGAGACAGGAGACTTTGGTCAACTAGTAGACCTTAGGCTTCAACAACAATACAATGACAATGAAATGTTCAAAATGATTGAGGCAGCAGCAGCATGTGTTCGCCATTCTGCTCCAAAACGACCTAGTATGGTTCAGGTGATAAGAGCCTTAGACAACGGTGATCAACTATACGGTCTATCAAATGGGGTGAGATATGGTCAGAGCACTATTTATGATTCTGGTCAGTATAATGAAGACATTACAAGATTCAGAAAGATGGTTAATCCAAGCTTTGATGATTCCGAGTTTGATAAGAACAGCTCGGAATTTCGTTCAACTGTTTCAAGAGGAACGACTGAATCCGACCCTGCAAGGATGTTAGACAGTGCAGCAACTAGTGATTCAGAATTTAAAGTTTTCCACAACCAAAGGGACAATATTACCCAGAACATCTCTTAA 2175 0.4772 MANQSSSNGSSVSDSIKASAPLSSSSLQSSDAESSLPSNPPPPSPSSPLSSPPPPENSSPPPTTTPPVLENSPPPPTPSLSPPPTPSTSPPPTPSTSPPPTPSTSPPPTPSTSPPPSPSPSPPAPVQFSPPPTLSPPPPLTNPPSQGSNPPPSLSPPPPSQPLPSSPPPQNSPPSPQSSAPPPQSLSPPTVTTTPPSPASLITPPALQTASASKPPSQLRSTPGLTPTFKPKQKSTPPKSNPPTASPSSSGNSHTGEVVGLALAGVFIVGFLALVIFFIFRNKNKRVNIYAVPPPRKSHMRAAGAAGDVLYYVEEPGLGNGAQQDGMHIKSPSDPALSGGQLVFSYEKIAEITNGFSSENIIGEGGFGYVYKASMPDGRVGALKILKAGSGQGEREFRSEVDIISRIHHRHLVSLIGYCISEQQRVLIYEFVPNGNLNQHLHGSELPILDWSKRMKIAIGSARGLSYLHDGCNPKIIHRDIKSANILLDNAYEAQVADFGLARLTDDAKTHVSTRVMGTFGYMAPEYATTGKLTDKSDIFSFGVVLLELITGRKPVDPMQPLGQESLVEWARPLLLRAVETGDFGQLVDLRLQQQYNDNEMFKMIEAAAACVRHSAPKRPSMVQVIRALDNGDQLYGLSNGVRYGQSTIYDSGQYNEDITRFRKMVNPSFDDSEFDKNSSEFRSTVSRGTTESDPARMLDSAATSDSEFKVFHNQRDNITQNIS 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01442 724 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 267 678 IPR047117 -
Phco4g01442 724 Pfam Protein tyrosine and serine/threonine kinase 359 628 IPR001245 GO:0004672|GO:0006468
Phco4g01442 724 MobiDBLite consensus disorder prediction 682 700 - -
Phco4g01442 724 MobiDBLite consensus disorder prediction 1 254 - -
Phco4g01442 724 FunFam proline-rich receptor-like protein kinase PERK8 432 644 - -
Phco4g01442 724 Gene3D Phosphorylase Kinase; domain 1 322 431 - -
Phco4g01442 724 MobiDBLite consensus disorder prediction 203 235 - -
Phco4g01442 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Phco4g01442 724 SMART serkin_6 356 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01442 724 MobiDBLite consensus disorder prediction 673 705 - -
Phco4g01442 724 SUPERFAMILY Protein kinase-like (PK-like) 333 629 IPR011009 -
Phco4g01442 724 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 332 431 - -
Phco4g01442 724 MobiDBLite consensus disorder prediction 36 202 - -
Phco4g01442 724 ProSiteProfiles Protein kinase domain profile. 356 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01442 724 Gene3D Transferase(Phosphotransferase) domain 1 432 638 - -
Phco4g01442 724 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01442 Phco-Chr4 12675586 12679628 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Phco4g01442 PK_Tyr_Ser-Thr 3.5e-46 CL0016