Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01402 ATGATGACAAGTGCAATGCGACGGATGCACTTGCTAATTAACCGGCCCCGTTATTGCTTTCCTACCTCTCTCCCCTTTCAAACAAGTTTCATGATCACACAAACTATGGCTTCTCTAACTTCACTTCTTTCTGTTCTCATTCCTCTTCTTGCAACTTCTTTTGTGAGTGTAGCTGTGTTTTCCTTACAAGCTTCTCTCCAAACAACTTATTTGGAACCTCTCAGATGCTCCTCTAAGATCAGCACATGCAATGCCTCACTCTATCACATAAGTTACAGTCACAATGCAGATGACGTAGCCAACTTTTATTCCGTTCATCCCTCCCAAATCAAACCTATAATGCGTGGCACAAAGCAAGATTACCTTATAACAGTGCCTTGTTCCTGCCATAACACCAATGACCTTGCCGGATATTTCTACGATACAACCTACAAGGTGAAGCCTAATGACTCGTCTGTGGAGATTAACAACATTGTTTACAGTGGCCAAGCCTGGTCTATTAACAGAGAAGTGGACCCAAATGAGGACTTGGCAATAGATCTTCCTTGTGGGTGTTCCGAAAAAAATGACTCCCAAATTGTTGTCACCTATACAGTTCAGCGGAATGATACACCCACATCAATCGCTACTATGCTAAATGCTACGCTAGATGGCATGGTTAGCATGAACCAAGTTCTGGCTCAAAACCCCTCATACATAGATATTACTTGGGTGCTATATGTTCCAAGACAACTCAACGGGTTGCCTTCCAAAGGAAAAGACAAGAAACACCATATAATCATTGGCATCTTAGCGGGTGTGGCATTCTTTTCAACTATTACTTTGATCATTCTCGTTGTCGTTCTGAGGAGATCCAGGGCCAATGTAACCGCCAAAAATGATCCAAATATTGTGTCTAAAAGATCAGTTGGAGTTAGAACTATTTCCATAAAGAACCGAGACTTTCATGCAGAACATGGACAAGATGCAACTCCATTTGAATCAGAAAGACCAGTAATTTATGCTCTAGAGGAGATTGAAGAGGCTACAAATAACTTTGATGAAACACGAAGGATTGGAGTAGGTGGATACGGGAGGGTGTATTTCGGAATGTTAGAGGAGAAGGAGGTTGCTGTAAAGAAGATGAGATCCAATAAATCCAAAGAATTCTATGCAGAACTCAAAGCCTTGTGTAAGATCCATCACATTAACATTGTGGAGTTGTTAGGATATGCTAGCGGAGATGACCACCTTTATCTGGTGTATGAATATGTTCCAAATGGATCTCTCAGTGAACACCTTCACGATCCATTGCTGAAAGGTCATCAGCCTCTCTCTTGGTGTGCTAGGATTCAAATTGCATTGGATGCAGCAAAAGGTCTTGAATACATACATGATTACACGAAAGCACGATATGTGCATCGTGATATAAAGACAAGTAATATTCTCCTTGATGAGAAGCTCAGAGCAAAGGTAGCAGATTTTGGACTTGCAAAGCTAGTAGAACGAACCAATGATGAAGAATTCATAGCAACAAGGCTTGTTGGAACACCGGGCTACCTTCCACCAGAATCTGTTAAGGAGCTTCAAGTGACTATAAAAACAGATATATTTGCATTTGGGGTGGTTCTGTCAGAGTTGATAACAGGGAAACGTGCACTATTTCGTGACAGCCAACAAGCCAACAATATGAAATCACTTGTTACGGTTGTTAGCCAAATCTTCGGAAATAAGTACCCACAGACTGTTTTAGCAGATGTCATAGATGGGAATCTTCAGCATAGCTATCCCATGGAAGATGTCTACAGGATTGCAGAACTAGCTCATTGGTGCTTGTGCGAAGATCCAAATGACAGGCCTGAGATGAGGGAGATAGTTGTGGCATTGTCACATATTGTTATGTCATCCACAGAATGGGAAGCATCACTAGGTGGAGACAGCCAAGTCTTCAGCGGGGTACTTGATGGAAGATGA 1953 0.4188 MMTSAMRRMHLLINRPRYCFPTSLPFQTSFMITQTMASLTSLLSVLIPLLATSFVSVAVFSLQASLQTTYLEPLRCSSKISTCNASLYHISYSHNADDVANFYSVHPSQIKPIMRGTKQDYLITVPCSCHNTNDLAGYFYDTTYKVKPNDSSVEINNIVYSGQAWSINREVDPNEDLAIDLPCGCSEKNDSQIVVTYTVQRNDTPTSIATMLNATLDGMVSMNQVLAQNPSYIDITWVLYVPRQLNGLPSKGKDKKHHIIIGILAGVAFFSTITLIILVVVLRRSRANVTAKNDPNIVSKRSVGVRTISIKNRDFHAEHGQDATPFESERPVIYALEEIEEATNNFDETRRIGVGGYGRVYFGMLEEKEVAVKKMRSNKSKEFYAELKALCKIHHINIVELLGYASGDDHLYLVYEYVPNGSLSEHLHDPLLKGHQPLSWCARIQIALDAAKGLEYIHDYTKARYVHRDIKTSNILLDEKLRAKVADFGLAKLVERTNDEEFIATRLVGTPGYLPPESVKELQVTIKTDIFAFGVVLSELITGKRALFRDSQQANNMKSLVTVVSQIFGNKYPQTVLADVIDGNLQHSYPMEDVYRIAELAHWCLCEDPNDRPEMREIVVALSHIVMSSTEWEASLGGDSQVFSGVLDGR 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01402 650 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 72 644 IPR044812 GO:0019199|GO:0045087
Phco4g01402 650 SMART serkin_6 346 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01402 650 Gene3D LysM domain 188 247 IPR036779 -
Phco4g01402 650 Gene3D Phosphorylase Kinase; domain 1 325 417 - -
Phco4g01402 650 ProSiteProfiles Protein kinase domain profile. 346 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01402 650 SUPERFAMILY Protein kinase-like (PK-like) 328 622 IPR011009 -
Phco4g01402 650 FunFam Kinase family protein 322 417 - -
Phco4g01402 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Phco4g01402 650 Gene3D Transferase(Phosphotransferase) domain 1 418 639 - -
Phco4g01402 650 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Phco4g01402 650 SUPERFAMILY LysM domain 195 242 IPR036779 -
Phco4g01402 650 Pfam Protein kinase domain 347 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01402 650 FunFam PTI1-like tyrosine-protein kinase 3 418 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01402 Phco-Chr4 12133660 12138193 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Phco4g01402 Pkinase 6.5e-51 CL0016