Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01385 ATGATGCTATCAATGGATTATTTTTGGGAGCAAAATTTATTCTTTTGTCGTCACCATCACTTGGTGGTGGGTGGAGATAGAGAGGTTTATATCTCTCTCTTTCTCTCTAGCCGGTTTAGCGCCACCTTTTATGAACTCAAAGCTTTACCGATCTGCACAGGAGAGTTCTACCTTGTGTTTTTACCTTCCAGCAAGAGTAATGTATCGAGGTTAAAATCTAGAGCTGATATGAATACTTATTCACATGTTCCTCCTGGATTTCGTTTCCATCCCACCGATGAAGAACTTGTTCATTACTACCTTAAGAAAAAGGTAGCTTCTAAAAGGATTGACATAGATGTGATAAAAGATGTCGATCTCTATAAAATCGAGCCATGGGATCTTCAAGAATTATGCAAAAATGGAAGCCATGAACAAGATGAATGGTATTTCTTTAGTCATAAGGACAAGAAGTACCCAACAGGAACTCGTACCAATAGAGCTACAAAAGCAGGATTCTGGAAAGCTACTGGGAGAGACAAGGCAATTTACTGTAAGCATTGCCTTACTGGAATGAGAAAGACTCTTGTGTTTTACAAAGGAAGAGCTCCCAATGGACAGAAATCTGACTGGATCATGCATGAGTATCGACTAGAAACTAATGAAAATGGAACTCCTCAGGAAGAAGGGTGGGTTGTATGTAGAGTGTTCAAAAAAAGAATGACAACAGTGAGGAAAATGGGGGATTACGTGTCGCCATGTTGGTATGATGACCAAGTCTCGTTCATGCAAGAACTTGAATCTCCTATGCGAATTTCTAACCCTAATGCACCAAACCGTCACCCCTACCCCTGCAAGAAGGAGTTGGAATTGCAATTCAATATTCCCCACCATGACGCTTTTCTCCAACTTCCACAACTTGAAGGTCCCATAGTTCCTCAATCTGTGGCTAGTTTGAGTTTTAGCCCAGTTGTTTCTTACAGCTATGGTTGCAAAAACAATGGAAATGCTTTGCAGTCTTCGTCACTCACTCAAGAACATCGCCAGCAACAAAGTCTGCAATTTCACTTTGCTAGTAATGATCAATCTATGGACAATGTTATGGATTGGCGAGTACTTGACAAATTTGTGGCTAATCAGCTGAGTCACGATGAACATTTTGCCAATGTGGTTGAACAGATTAAGTTGCGAGCAAACGGATCTACAAAACCAGAAACTTGTCAGGAAATTGCTTCCACTTCCATCTCCGGTTGGGATTGA 1239 0.4084 MMLSMDYFWEQNLFFCRHHHLVVGGDREVYISLFLSSRFSATFYELKALPICTGEFYLVFLPSSKSNVSRLKSRADMNTYSHVPPGFRFHPTDEELVHYYLKKKVASKRIDIDVIKDVDLYKIEPWDLQELCKNGSHEQDEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYCKHCLTGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTPQEEGWVVCRVFKKRMTTVRKMGDYVSPCWYDDQVSFMQELESPMRISNPNAPNRHPYPCKKELELQFNIPHHDAFLQLPQLEGPIVPQSVASLSFSPVVSYSYGCKNNGNALQSSSLTQEHRQQQSLQFHFASNDQSMDNVMDWRVLDKFVANQLSHDEHFANVVEQIKLRANGSTKPETCQEIASTSISGWD 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01385 412 ProSiteProfiles NAC domain profile. 83 232 IPR003441 GO:0003677|GO:0006355
Phco4g01385 412 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 82 338 - -
Phco4g01385 412 FunFam NAC domain-containing protein 92 236 - -
Phco4g01385 412 Pfam No apical meristem (NAM) protein 84 211 IPR003441 GO:0003677|GO:0006355
Phco4g01385 412 Gene3D NAC domain 92 236 IPR036093 GO:0003677|GO:0006355
Phco4g01385 412 SUPERFAMILY NAC domain 79 232 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01385 Phco-Chr4 11968572 11972232 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco4g01385 NAM 8e-37 No_clan