Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01382 ATGTCTCTTTGTCACTCTCAGAAACGGCATAGCTATCCAAATCCTACAGAATATCAGCGCGTTGGCACTGGCATTGTGCATGCAACGTTCAACACGGAAGTGGACTATGGTCTAAAATTGCGGAAAGTTGCCCATGTTGGGTTCAACTCAGTTCCTAATTGGCTTCTCATTCTCAAGGAAGAGAAGTTTTTCACTCGCTGTTTGAGTCATGGCTCTCTAAAGAAGAATGAGAAGAACATTTTTTGTTTAGATTGCTGCACGAGTATTTGCCTCCACTGTTTGCCCTTTCACCGCTCTCACGTCCTTTTGCAGGTACGAAGATATATGTACCATGATGTGTTACGGCTTGGTGATGCTAAAACAGTGTTGAATTGTTCCCTTGTTCAACCTTACACGACAAACAAAACCAAGGTTGTGTTTTTGAAACAAAGGCCACACACTCGTTCTCCCAAAGGCTCTAGCAACCTTTGCATCACGTGTGATCGTAACCTCCAAGACCCATACATCTTCTGCTCTCTGTCTTGCAAGGTGCATCAACATCTTCTACTACTTACCAAAAGCACAACCGTGAAAGGCACTTGCGACAAGTATGAATTCTCTGTGCTGCTAGACAAAGAACGAATCAGCGAGAACACACAAGAAGTTGAAGATAGCCAAATCACAACAGATTCAGTCCTAGACTCACCCACTGTTTCTGGGTCAACAAGTAGTAACGGTGAGGGTGGTGTGGCAGAGAGTGTGAATGAGTCACTAAAAAAGAAGCGTGGCAATGTTGACACGGTGCCAGAGATTTGGTACACCATGGTAAACCGGCGAAAAGGTGTTCCTCATCGATCTCCACTGTACTAA 849 0.4452 MSLCHSQKRHSYPNPTEYQRVGTGIVHATFNTEVDYGLKLRKVAHVGFNSVPNWLLILKEEKFFTRCLSHGSLKKNEKNIFCLDCCTSICLHCLPFHRSHVLLQVRRYMYHDVLRLGDAKTVLNCSLVQPYTTNKTKVVFLKQRPHTRSPKGSSNLCITCDRNLQDPYIFCSLSCKVHQHLLLLTKSTTVKGTCDKYEFSVLLDKERISENTQEVEDSQITTDSVLDSPTVSGSTSSNGEGGVAESVNESLKKKRGNVDTVPEIWYTMVNRRKGVPHRSPLY 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01382 282 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 50 281 - -
Phco4g01382 282 MobiDBLite consensus disorder prediction 212 255 - -
Phco4g01382 282 ProSiteProfiles Zinc finger B-box type profile. 62 116 IPR000315 GO:0008270
Phco4g01382 282 MobiDBLite consensus disorder prediction 214 244 - -
Phco4g01382 282 Pfam PLATZ transcription factor 106 177 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01382 Phco-Chr4 11928779 11930244 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Phco4g01382 PLATZ 9.3e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01382 4 11928779 11930244 Phco4g01382 4 11928779 11930244 ECH